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G9AHI1

- G9AHI1_RHIFH

UniProt

G9AHI1 - G9AHI1_RHIFH

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Protein
Submitted name:

DNA ligase, putative

Gene

ligC

Organism
Rhizobium fredii (strain HH103) (Sinorhizobium fredii)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciSFRE1117943:GJT5-5208-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligase, putativeImported (EC:6.5.1.1Imported)
Gene namesi
Name:ligCImported
Ordered Locus Names:SFHH103_06053Imported
Encoded oniPlasmid pSfHH103eImported
OrganismiRhizobium fredii (strain HH103) (Sinorhizobium fredii)Imported
Taxonomic identifieri1117943 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
ProteomesiUP000007735: Plasmid pSfHH103e

Structurei

3D structure databases

ProteinModelPortaliG9AHI1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.

Sequencei

Sequence statusi: Complete.

G9AHI1-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MPSPAHRKPT KETAPSRPAA KAKAIDVVSA GGFALPVSTA PMEARSAPEL
60 70 80 90 100
PSDGAWQYEP KWDGFRCLAF KSGGEVDLRA KSGKPLGRFF PEVIALLREL
110 120 130 140 150
GASQFVLDGE LVIEVDGRLS FDALQMRLHP AESRVQKLSQ QTPARLILFD
160 170 180 190 200
MLVDAKGAVL TDKPLSSRRA ALEAFATRNV IPDKLELSPF TLARQEAEHW
210 220 230 240 250
LTSWEAGATD GVVAKRRDGP YECGERAMVK VKRLKTADCV VGGFRYESGS
260 270 280 290 300
DKIGSLLLGL YDTDGTLNHV GFTATISDKE RPALTRRLEA LREPPGFTGN
310 320 330 340 350
APGGPSRWSA ERSGEWQPVR PELVVEVRFD HVSSRRFRHG TKLMRWRPDK
360
DPRQCTYEQI EPR
Length:363
Mass (Da):40,170
Last modified:February 22, 2012 - v1
Checksum:i1277FE52DB05583A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
HE616899 Genomic DNA. Translation: CCF00513.1.
RefSeqiWP_014332165.1. NC_016815.1.
YP_005192652.1. NC_016815.1.

Genome annotation databases

EnsemblBacteriaiCCF00513; CCF00513; SFHH103_06053.
GeneIDi11800241.
KEGGisfh:SFHH103_06053.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
HE616899 Genomic DNA. Translation: CCF00513.1 .
RefSeqi WP_014332165.1. NC_016815.1.
YP_005192652.1. NC_016815.1.

3D structure databases

ProteinModelPortali G9AHI1.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CCF00513 ; CCF00513 ; SFHH103_06053 .
GeneIDi 11800241.
KEGGi sfh:SFHH103_06053.

Phylogenomic databases

KOi K01971.

Enzyme and pathway databases

BioCyci SFRE1117943:GJT5-5208-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Entry informationi

Entry nameiG9AHI1_RHIFH
AccessioniPrimary (citable) accession number: G9AHI1
Entry historyi
Integrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: October 29, 2014
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported, PlasmidImported

External Data

Dasty 3