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G9AHI1

- G9AHI1_RHIFH

UniProt

G9AHI1 - G9AHI1_RHIFH

Protein
Submitted name:

DNA ligase, putative

Gene

ligC

Organism
Rhizobium fredii (strain HH103) (Sinorhizobium fredii)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 19 (01 Oct 2014)
      Sequence version 1 (22 Feb 2012)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciSFRE1117943:GJT5-5208-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA ligase, putativeImported (EC:6.5.1.1Imported)
    Gene namesi
    Name:ligCImported
    Ordered Locus Names:SFHH103_06053Imported
    Encoded oniPlasmid pSfHH103eImported
    OrganismiRhizobium fredii (strain HH103) (Sinorhizobium fredii)Imported
    Taxonomic identifieri1117943 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
    ProteomesiUP000007735: Plasmid pSfHH103e

    Structurei

    3D structure databases

    ProteinModelPortaliG9AHI1.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    G9AHI1-1 [UniParc]FASTAAdd to Basket

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    MPSPAHRKPT KETAPSRPAA KAKAIDVVSA GGFALPVSTA PMEARSAPEL    50
    PSDGAWQYEP KWDGFRCLAF KSGGEVDLRA KSGKPLGRFF PEVIALLREL 100
    GASQFVLDGE LVIEVDGRLS FDALQMRLHP AESRVQKLSQ QTPARLILFD 150
    MLVDAKGAVL TDKPLSSRRA ALEAFATRNV IPDKLELSPF TLARQEAEHW 200
    LTSWEAGATD GVVAKRRDGP YECGERAMVK VKRLKTADCV VGGFRYESGS 250
    DKIGSLLLGL YDTDGTLNHV GFTATISDKE RPALTRRLEA LREPPGFTGN 300
    APGGPSRWSA ERSGEWQPVR PELVVEVRFD HVSSRRFRHG TKLMRWRPDK 350
    DPRQCTYEQI EPR 363
    Length:363
    Mass (Da):40,170
    Last modified:February 22, 2012 - v1
    Checksum:i1277FE52DB05583A
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    HE616899 Genomic DNA. Translation: CCF00513.1.
    RefSeqiYP_005192652.1. NC_016815.1.

    Genome annotation databases

    EnsemblBacteriaiCCF00513; CCF00513; SFHH103_06053.
    GeneIDi11800241.
    KEGGisfh:SFHH103_06053.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    HE616899 Genomic DNA. Translation: CCF00513.1 .
    RefSeqi YP_005192652.1. NC_016815.1.

    3D structure databases

    ProteinModelPortali G9AHI1.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CCF00513 ; CCF00513 ; SFHH103_06053 .
    GeneIDi 11800241.
    KEGGi sfh:SFHH103_06053.

    Phylogenomic databases

    KOi K01971.

    Enzyme and pathway databases

    BioCyci SFRE1117943:GJT5-5208-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

    Entry informationi

    Entry nameiG9AHI1_RHIFH
    AccessioniPrimary (citable) accession number: G9AHI1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 22, 2012
    Last sequence update: February 22, 2012
    Last modified: October 1, 2014
    This is version 19 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported, PlasmidImported

    External Data

    Dasty 3