G9AHI1 (G9AHI1_RHIFH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
DNA ligase, putative EMBL CCF00513.1
EC=6.5.1.1 EMBL CCF00513.1

Gene names

Name:	ligC EMBL CCF00513.1
Ordered Locus Names:	SFHH103_06053 EMBL CCF00513.1

Encoded on

Plasmid pSfHH103e EMBL CCF00513.1

Organism

Rhizobium fredii (strain HH103) (Sinorhizobium fredii) [Complete proteome] [HAMAP] EMBL CCF00513.1

Taxonomic identifier

1117943 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Sinorhizobium/Ensifer group › Sinorhizobium › Sinorhizobium fredii group › Rhizobium fredii

Protein attributes

Sequence length	363 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL CCF00513.1
Technical term	Complete proteome Plasmid EMBL CCF00513.1
Gene Ontology (GO)
Biological_process	DNA recombination Inferred from electronic annotation. Source: InterPro DNA repair Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	G9AHI1 [UniParc]. Last modified February 22, 2012. Version 1. Checksum: 1277FE52DB05583A	FASTA	363	40,170
	10 20 30 40 50 60 MPSPAHRKPT KETAPSRPAA KAKAIDVVSA GGFALPVSTA PMEARSAPEL PSDGAWQYEP 70 80 90 100 110 120 KWDGFRCLAF KSGGEVDLRA KSGKPLGRFF PEVIALLREL GASQFVLDGE LVIEVDGRLS 130 140 150 160 170 180 FDALQMRLHP AESRVQKLSQ QTPARLILFD MLVDAKGAVL TDKPLSSRRA ALEAFATRNV 190 200 210 220 230 240 IPDKLELSPF TLARQEAEHW LTSWEAGATD GVVAKRRDGP YECGERAMVK VKRLKTADCV 250 260 270 280 290 300 VGGFRYESGS DKIGSLLLGL YDTDGTLNHV GFTATISDKE RPALTRRLEA LREPPGFTGN 310 320 330 340 350 360 APGGPSRWSA ERSGEWQPVR PELVVEVRFD HVSSRRFRHG TKLMRWRPDK DPRQCTYEQI EPR

References

[1]

"Genome sequence of the soybean symbiont Sinorhizobium fredii HH103." Weidner S., Becker A., Bonilla I., Jaenicke S., Lloret J., Margaret I., Puhler A., Ruiz-Sainz J.E., Schneiker-Bekel S., Szczepanowski R., Vinardell J.M., Zehner S., Gottfert M. J. Bacteriol. 194:1617-1618(2012) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: HH103 EMBL CCF00513.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	HE616899 Genomic DNA. Translation: CCF00513.1.
RefSeq	YP_005192652.1. NC_016815.1.
3D structure databases
ProteinModelPortal	G9AHI1.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CCF00513; CCF00513; SFHH103_06053.
GeneID	11800241.
KEGG	sfh:SFHH103_06053.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K01971.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
ProtoNet	Search...

Entry information

Entry name

G9AHI1_RHIFH

Accession

Primary (citable) accession number: G9AHI1

Entry history

Integrated into UniProtKB/TrEMBL:	February 22, 2012
Last sequence update:	February 22, 2012
Last modified:	April 3, 2013
This is version 10 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)