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G9AHI1 (G9AHI1_RHIFH) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=6.5.1.1 EMBL CCF00513.1
Gene names
Name:ligC EMBL CCF00513.1
Ordered Locus Names:SFHH103_06053 EMBL CCF00513.1
Encoded onPlasmid pSfHH103e EMBL CCF00513.1
OrganismRhizobium fredii (strain HH103) (Sinorhizobium fredii) [Complete proteome] [HAMAP] EMBL CCF00513.1
Taxonomic identifier1117943 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium

Protein attributes

Sequence length363 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
G9AHI1 [UniParc].

Last modified February 22, 2012. Version 1.
Checksum: 1277FE52DB05583A

FASTA36340,170
        10         20         30         40         50         60 
MPSPAHRKPT KETAPSRPAA KAKAIDVVSA GGFALPVSTA PMEARSAPEL PSDGAWQYEP 

        70         80         90        100        110        120 
KWDGFRCLAF KSGGEVDLRA KSGKPLGRFF PEVIALLREL GASQFVLDGE LVIEVDGRLS 

       130        140        150        160        170        180 
FDALQMRLHP AESRVQKLSQ QTPARLILFD MLVDAKGAVL TDKPLSSRRA ALEAFATRNV 

       190        200        210        220        230        240 
IPDKLELSPF TLARQEAEHW LTSWEAGATD GVVAKRRDGP YECGERAMVK VKRLKTADCV 

       250        260        270        280        290        300 
VGGFRYESGS DKIGSLLLGL YDTDGTLNHV GFTATISDKE RPALTRRLEA LREPPGFTGN 

       310        320        330        340        350        360 
APGGPSRWSA ERSGEWQPVR PELVVEVRFD HVSSRRFRHG TKLMRWRPDK DPRQCTYEQI 


EPR 

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References

[1]"Genome sequence of the soybean symbiont Sinorhizobium fredii HH103."
Weidner S., Becker A., Bonilla I., Jaenicke S., Lloret J., Margaret I., Puhler A., Ruiz-Sainz J.E., Schneiker-Bekel S., Szczepanowski R., Vinardell J.M., Zehner S., Gottfert M.
J. Bacteriol. 194:1617-1618(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: HH103 EMBL CCF00513.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
HE616899 Genomic DNA. Translation: CCF00513.1.
RefSeqYP_005192652.1. NC_016815.1.

3D structure databases

ProteinModelPortalG9AHI1.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCCF00513; CCF00513; SFHH103_06053.
GeneID11800241.
KEGGsfh:SFHH103_06053.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.

Enzyme and pathway databases

BioCycSFRE1117943:GJT5-5208-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
ProtoNetSearch...

Entry information

Entry nameG9AHI1_RHIFH
AccessionPrimary (citable) accession number: G9AHI1
Entry history
Integrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: February 19, 2014
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)