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G9ABJ8

- G9ABJ8_RHIFH

UniProt

G9ABJ8 - G9ABJ8_RHIFH

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Protein
Submitted name: Putative ATP-dependent DNA ligase protein
Gene
SFHH103_02797
Organism
Rhizobium fredii (strain HH103) (Sinorhizobium fredii)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro
  3. DNA primase activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciSFRE1117943:GJT5-2834-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative ATP-dependent DNA ligase proteinImported
Gene namesi
Ordered Locus Names:SFHH103_02797Imported
OrganismiRhizobium fredii (strain HH103) (Sinorhizobium fredii)Imported
Taxonomic identifieri1117943 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
ProteomesiUP000007735: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

G9ABJ8-1 [UniParc]FASTAAdd to Basket

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MAARSEPLSE YNRRRDFTKT REPKGAVART HAGRKRFLVQ KHDATRLHYD    50
FRLEWEGVLK SWAVTRGPSL NPEDKRLAIR TEDHPLAYGD FEGTIPEGEY 100
GGGTVMLWDT GWWEPEGDPS KGLKKGKLSF KLHGSRMKGG WALVRMRPRD 150
GEKRENWLLV KETDEIASED GENLIKENIT SVVTGRAMDE IAGGKGEKRA 200
RFWHSNKSTA ANLKAGAIAE NDNARRRSAR RPSGKLPAFK APQLATLVTK 250
APAGETWLNE AKFDGYRLLC AIGGGTVRCY TRNGLDWTEK FPAIAAALAE 300
LDCKSALIDG EVVALSDAGP SFSALQKALR TGASTRLYAF DLIELDGKDL 350
SREPLIERKE KLKLLLGSLG TTATVQYSEH VEGNGEHVLA AICKAGQEGI 400
IAKEAKAPYR SGRTRSWLKV KCTRRQEFVI GGYTPSSKKG RPFASILVGT 450
FEGGKLIYRG GVGTGFGEKV MQELAAAFAS RSRETPPFDS VPRERMRNAV 500
WLKPDLVAEV DFAEFTADGH VRHGSFEGMR EDKEAKAVKL ETAKPTGAAP 550
GAAKSKPSAK TSKASSAKGD TDVLGIHISH PDRILFQGQG ITKIDLARYY 600
AVVAERMLPF TADHPVSLVR CPQGGQRHCF YQKHASDGFP DEIKEVPIEE 650
SSGSTENYMY VRHAKGLVAA VQMGTLEFHI WGATIDKLET PDRLVFDFDP 700
DPSVDFTTVK NAAVALRDEL ADIGLQSFAL VTGGKGVHVV VPLVRRASWD 750
DAKSFAKAVA QNIADRDPDH FVATMSKAKR KGRIFIDWLR NERGATAIAP 800
YSSRAREGGP IATPVGWDEM ERLSGANTFH IGDILERIEA DTDPWRDIGK 850
VKQSLTKKMM DSVAK 865
Length:865
Mass (Da):95,143
Last modified:February 22, 2012 - v1
Checksum:iC79B5A6E22EEA225
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
HE616890 Genomic DNA. Translation: CCE97289.1.
RefSeqiYP_005190114.1. NC_016812.1.

Genome annotation databases

EnsemblBacteriaiCCE97289; CCE97289; SFHH103_02797.
GeneIDi11814800.
KEGGisfh:SFHH103_02797.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
HE616890 Genomic DNA. Translation: CCE97289.1 .
RefSeqi YP_005190114.1. NC_016812.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CCE97289 ; CCE97289 ; SFHH103_02797 .
GeneIDi 11814800.
KEGGi sfh:SFHH103_02797.

Phylogenomic databases

KOi K01971.

Enzyme and pathway databases

BioCyci SFRE1117943:GJT5-2834-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: HH103Imported.

Entry informationi

Entry nameiG9ABJ8_RHIFH
AccessioniPrimary (citable) accession number: G9ABJ8
Entry historyi
Integrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: April 16, 2014
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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