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G9ABJ8

- G9ABJ8_RHIFH

UniProt

G9ABJ8 - G9ABJ8_RHIFH

Protein
Submitted name:

Putative ATP-dependent DNA ligase protein

Gene

SFHH103_02797

Organism
Rhizobium fredii (strain HH103) (Sinorhizobium fredii)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 16 (01 Oct 2014)
      Sequence version 1 (22 Feb 2012)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro
    3. DNA primase activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciSFRE1117943:GJT5-2834-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative ATP-dependent DNA ligase proteinImported
    Gene namesi
    Ordered Locus Names:SFHH103_02797Imported
    OrganismiRhizobium fredii (strain HH103) (Sinorhizobium fredii)Imported
    Taxonomic identifieri1117943 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
    ProteomesiUP000007735: Chromosome

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR002755. DNA_primase_S.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF01896. DNA_primase_S. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    G9ABJ8-1 [UniParc]FASTAAdd to Basket

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    MAARSEPLSE YNRRRDFTKT REPKGAVART HAGRKRFLVQ KHDATRLHYD    50
    FRLEWEGVLK SWAVTRGPSL NPEDKRLAIR TEDHPLAYGD FEGTIPEGEY 100
    GGGTVMLWDT GWWEPEGDPS KGLKKGKLSF KLHGSRMKGG WALVRMRPRD 150
    GEKRENWLLV KETDEIASED GENLIKENIT SVVTGRAMDE IAGGKGEKRA 200
    RFWHSNKSTA ANLKAGAIAE NDNARRRSAR RPSGKLPAFK APQLATLVTK 250
    APAGETWLNE AKFDGYRLLC AIGGGTVRCY TRNGLDWTEK FPAIAAALAE 300
    LDCKSALIDG EVVALSDAGP SFSALQKALR TGASTRLYAF DLIELDGKDL 350
    SREPLIERKE KLKLLLGSLG TTATVQYSEH VEGNGEHVLA AICKAGQEGI 400
    IAKEAKAPYR SGRTRSWLKV KCTRRQEFVI GGYTPSSKKG RPFASILVGT 450
    FEGGKLIYRG GVGTGFGEKV MQELAAAFAS RSRETPPFDS VPRERMRNAV 500
    WLKPDLVAEV DFAEFTADGH VRHGSFEGMR EDKEAKAVKL ETAKPTGAAP 550
    GAAKSKPSAK TSKASSAKGD TDVLGIHISH PDRILFQGQG ITKIDLARYY 600
    AVVAERMLPF TADHPVSLVR CPQGGQRHCF YQKHASDGFP DEIKEVPIEE 650
    SSGSTENYMY VRHAKGLVAA VQMGTLEFHI WGATIDKLET PDRLVFDFDP 700
    DPSVDFTTVK NAAVALRDEL ADIGLQSFAL VTGGKGVHVV VPLVRRASWD 750
    DAKSFAKAVA QNIADRDPDH FVATMSKAKR KGRIFIDWLR NERGATAIAP 800
    YSSRAREGGP IATPVGWDEM ERLSGANTFH IGDILERIEA DTDPWRDIGK 850
    VKQSLTKKMM DSVAK 865
    Length:865
    Mass (Da):95,143
    Last modified:February 22, 2012 - v1
    Checksum:iC79B5A6E22EEA225
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    HE616890 Genomic DNA. Translation: CCE97289.1.
    RefSeqiYP_005190114.1. NC_016812.1.

    Genome annotation databases

    EnsemblBacteriaiCCE97289; CCE97289; SFHH103_02797.
    GeneIDi11814800.
    KEGGisfh:SFHH103_02797.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    HE616890 Genomic DNA. Translation: CCE97289.1 .
    RefSeqi YP_005190114.1. NC_016812.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CCE97289 ; CCE97289 ; SFHH103_02797 .
    GeneIDi 11814800.
    KEGGi sfh:SFHH103_02797.

    Phylogenomic databases

    KOi K01971.

    Enzyme and pathway databases

    BioCyci SFRE1117943:GJT5-2834-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR002755. DNA_primase_S.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF01896. DNA_primase_S. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: HH103Imported.

    Entry informationi

    Entry nameiG9ABJ8_RHIFH
    AccessioniPrimary (citable) accession number: G9ABJ8
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 22, 2012
    Last sequence update: February 22, 2012
    Last modified: October 1, 2014
    This is version 16 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3