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G9A4S8 (G9A4S8_RHIFH) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Elongation factor Tu HAMAP-Rule MF_00118

Short name=EF-Tu HAMAP-Rule MF_00118
Gene names
Name:tufa3 EMBL CCE95572.1
Synonyms:tuf HAMAP-Rule MF_00118, tufa1 EMBL CCE95558.1
Ordered Locus Names:SFHH103_01059 EMBL CCE95558.1, SFHH103_01073 EMBL CCE95572.1
OrganismRhizobium fredii (strain HH103) (Sinorhizobium fredii) [Complete proteome] [HAMAP] EMBL CCE95572.1
Taxonomic identifier1117943 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium

Protein attributes

Sequence length391 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity. RuleBase RU000325 HAMAP-Rule MF_00118

Subunit structure

Monomer By similarity. HAMAP-Rule MF_00118

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00118.

Sequence similarities

Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily. RuleBase RU000325 HAMAP-Rule MF_00118

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding19 – 268GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding76 – 805GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding131 – 1344GTP By similarity HAMAP-Rule MF_00118

Sequences

Sequence LengthMass (Da)Tools
G9A4S8 [UniParc].

Last modified February 22, 2012. Version 1.
Checksum: 65D5D3E550C50658

FASTA39142,663
        10         20         30         40         50         60 
MAKSKFERNK PHVNIGTIGH VDHGKTSLTA AITKYFGEFK AYDQIDAAPE EKARGITIST 

        70         80         90        100        110        120 
AHVEYETPAR HYAHVDCPGH ADYVKNMITG AAQMDGAILV VSAADGPMPQ TREHILLARQ 

       130        140        150        160        170        180 
VGVPAIVVFL NKVDQVDDAE LLELVELEVR ELLSSYEFPG DDIPIVKGSA LAALEDSDKK 

       190        200        210        220        230        240 
IGEDAIRELM AAVDAYIPTP ERPVDLPFLM PIEDVFSISG RGTVVTGRVE RGIVKVGEEI 

       250        260        270        280        290        300 
EIVGIRPTTK TTCTGVEMFR KLLDQGQAGD NIGALLRGVD RNGVERGQVL CKPGSVKPHR 

       310        320        330        340        350        360 
KFKAEAYILT KEEGGRHTPF FTNYRPQFYF RTTDVTGIVT LPEGTEMVMP GDNVTVDVEL 

       370        380        390 
IVPIAMEEKL RFAIREGGRT VGAGIVASIV E 

« Hide

References

[1]"Genome sequence of the soybean symbiont Sinorhizobium fredii HH103."
Weidner S., Becker A., Bonilla I., Jaenicke S., Lloret J., Margaret I., Puhler A., Ruiz-Sainz J.E., Schneiker-Bekel S., Szczepanowski R., Vinardell J.M., Zehner S., Gottfert M.
J. Bacteriol. 194:1617-1618(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: HH103 EMBL CCE95572.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
HE616890 Genomic DNA. Translation: CCE95558.1.
HE616890 Genomic DNA. Translation: CCE95572.1.
RefSeqYP_005188383.1. NC_016812.1.
YP_005188397.1. NC_016812.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCCE95558; CCE95558; SFHH103_01059.
CCE95572; CCE95572; SFHH103_01073.
GeneID11813259.
11813271.
KEGGsfh:SFHH103_01059.
sfh:SFHH103_01073.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK02358.

Enzyme and pathway databases

BioCycSFRE1117943:GJT5-1074-MONOMER.
SFRE1117943:GJT5-1089-MONOMER.

Family and domain databases

Gene3D3.40.50.300. 1 hit.
HAMAPMF_00118_B. EF_Tu_B.
InterProIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSPR00315. ELONGATNFCT.
SUPFAMSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameG9A4S8_RHIFH
AccessionPrimary (citable) accession number: G9A4S8
Entry history
Integrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: June 11, 2014
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)