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G9A0Q4

- G9A0Q4_RHIFH

UniProt

G9A0Q4 - G9A0Q4_RHIFH

Protein

Xylose isomerase

Gene

xylA

Organism
Rhizobium fredii (strain HH103) (Sinorhizobium fredii)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 20 (01 Oct 2014)
      Sequence version 1 (22 Feb 2012)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    D-xylopyranose = D-xylulose.UniRule annotationSAAS annotation

    Cofactori

    Binds 2 magnesium ions per subunit.UniRule annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei100 – 1001UniRule annotation
    Active sitei103 – 1031UniRule annotation
    Metal bindingi231 – 2311Magnesium 1UniRule annotation
    Metal bindingi267 – 2671Magnesium 1UniRule annotation
    Metal bindingi267 – 2671Magnesium 2UniRule annotation
    Metal bindingi270 – 2701Magnesium 2UniRule annotation
    Metal bindingi295 – 2951Magnesium 1UniRule annotation
    Metal bindingi306 – 3061Magnesium 2UniRule annotation
    Metal bindingi308 – 3081Magnesium 2UniRule annotation
    Metal bindingi338 – 3381Magnesium 1UniRule annotation

    GO - Molecular functioni

    1. magnesium ion binding Source: UniProtKB-HAMAP
    2. xylose isomerase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. D-xylose metabolic process Source: UniProtKB-HAMAP
    2. pentose-phosphate shunt Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    IsomeraseUniRule annotationSAAS annotationImported

    Keywords - Biological processi

    Carbohydrate metabolism, Pentose shuntUniRule annotationSAAS annotation, Xylose metabolismUniRule annotationSAAS annotation

    Keywords - Ligandi

    MagnesiumUniRule annotationSAAS annotation, Metal-bindingUniRule annotationSAAS annotation

    Enzyme and pathway databases

    BioCyciSFRE1117943:GJT5-2996-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Xylose isomeraseUniRule annotation (EC:5.3.1.5UniRule annotation)
    Gene namesi
    Name:xylAUniRule annotationImported
    Ordered Locus Names:SFHH103_02958Imported
    OrganismiRhizobium fredii (strain HH103) (Sinorhizobium fredii)Imported
    Taxonomic identifieri1117943 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
    ProteomesiUP000007735: Chromosome

    Subcellular locationi

    Cytoplasm UniRule annotationSAAS annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    CytoplasmUniRule annotationSAAS annotation

    Interactioni

    Subunit structurei

    Homotetramer.UniRule annotationSAAS annotation

    Structurei

    3D structure databases

    ProteinModelPortaliG9A0Q4.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the xylose isomerase family.UniRule annotation

    Phylogenomic databases

    KOiK01805.

    Family and domain databases

    Gene3Di3.20.20.150. 1 hit.
    HAMAPiMF_00455. Xylose_isom_A.
    InterProiIPR013022. Xyl_isomerase-like_TIM-brl.
    IPR013452. Xylose_isom_bac.
    IPR001998. Xylose_isomerase.
    [Graphical view]
    PfamiPF01261. AP_endonuc_2. 1 hit.
    [Graphical view]
    PRINTSiPR00688. XYLOSISMRASE.
    SUPFAMiSSF51658. SSF51658. 1 hit.
    TIGRFAMsiTIGR02630. xylose_isom_A. 1 hit.
    PROSITEiPS51415. XYLOSE_ISOMERASE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    G9A0Q4-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSTGFFGDIA KIKYEGLEST NPLAFRHYNP DEVVLGKRME DHLRFAVAYW    50
    HTFVWPGGDP FGGQTFERPW FKDTMDAAKL KADVAFEFFQ LLGVPFYCFH 100
    DADVRPEGRN FAENTSNLNE IVDHFAEKQA ETGVKLLWGT ANLFSNRRYM 150
    GGAATNPDPD VFAFAAATVK TCIDATQRLG GENYVLWGGR EGYETLLNTD 200
    LKRELDQLGR FVNLVVEYKH KIGFKGAILI EPKPQEPTKH QYDFDVATVY 250
    GFLKKYGLEN EVKVNIEQGH AILAGHSFEH ELALANALGI FGSIDMNRND 300
    YQSGWDTDQF PNNVPEMALA YYHVLSGGGF KSGGTNFDAK LRRQSIDPED 350
    LLIGHIGGMD CCARGLKAAA KMVEDKALSG PLEKRYAGWN VPEAKKMLDG 400
    GFSLEEIEAW VRKADLNPQA KSGKQEYLEN VVNRYV 436
    Length:436
    Mass (Da):48,884
    Last modified:February 22, 2012 - v1
    Checksum:i9D9181BECB3AE72E
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    HE616890 Genomic DNA. Translation: CCE97450.1.
    RefSeqiWP_014329858.1. NC_016812.1.
    YP_005190275.1. NC_016812.1.

    Genome annotation databases

    EnsemblBacteriaiCCE97450; CCE97450; SFHH103_02958.
    GeneIDi11814945.
    KEGGisfh:SFHH103_02958.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    HE616890 Genomic DNA. Translation: CCE97450.1 .
    RefSeqi WP_014329858.1. NC_016812.1.
    YP_005190275.1. NC_016812.1.

    3D structure databases

    ProteinModelPortali G9A0Q4.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CCE97450 ; CCE97450 ; SFHH103_02958 .
    GeneIDi 11814945.
    KEGGi sfh:SFHH103_02958.

    Phylogenomic databases

    KOi K01805.

    Enzyme and pathway databases

    BioCyci SFRE1117943:GJT5-2996-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.150. 1 hit.
    HAMAPi MF_00455. Xylose_isom_A.
    InterProi IPR013022. Xyl_isomerase-like_TIM-brl.
    IPR013452. Xylose_isom_bac.
    IPR001998. Xylose_isomerase.
    [Graphical view ]
    Pfami PF01261. AP_endonuc_2. 1 hit.
    [Graphical view ]
    PRINTSi PR00688. XYLOSISMRASE.
    SUPFAMi SSF51658. SSF51658. 1 hit.
    TIGRFAMsi TIGR02630. xylose_isom_A. 1 hit.
    PROSITEi PS51415. XYLOSE_ISOMERASE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: HH103Imported.

    Entry informationi

    Entry nameiG9A0Q4_RHIFH
    AccessioniPrimary (citable) accession number: G9A0Q4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 22, 2012
    Last sequence update: February 22, 2012
    Last modified: October 1, 2014
    This is version 20 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3