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G8ZY51

- G8ZY51_TORDC

UniProt

G8ZY51 - G8ZY51_TORDC

Protein

DNA ligase

Gene

TDEL0G04510

Organism
Torulaspora delbrueckii (strain ATCC 10662 / CBS 1146 / NBRC 0425 / NCYC 2629 / NRRL Y-866) (Yeast) (Candida colliculosa)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 14 (01 Oct 2014)
      Sequence version 1 (22 Feb 2012)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).

    GO - Molecular functioni

    1. ATP binding Source: UniProtKB-KW
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: UniProtKB-KW
    3. DNA replication Source: UniProtKB-KW

    Keywords - Molecular functioni

    LigaseUniRule annotation

    Keywords - Biological processi

    DNA damage, DNA recombinationUniRule annotation, DNA repairUniRule annotation, DNA replicationUniRule annotation

    Keywords - Ligandi

    ATP-bindingUniRule annotation, Nucleotide-binding

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    DNA ligaseUniRule annotation (EC:6.5.1.1UniRule annotation)
    Gene namesi
    Name:TDEL0G04510Imported
    ORF Names:TDEL_0G04510Imported
    OrganismiTorulaspora delbrueckii (strain ATCC 10662 / CBS 1146 / NBRC 0425 / NCYC 2629 / NRRL Y-866) (Yeast) (Candida colliculosa)Imported
    Taxonomic identifieri1076872 [NCBI]
    Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeTorulaspora
    ProteomesiUP000005627: Chromosome 7

    Structurei

    3D structure databases

    ProteinModelPortaliG8ZY51.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ATP-dependent DNA ligase family.UniRule annotation

    Phylogenomic databases

    KOiK10777.
    OrthoDBiEOG7QC84G.

    Family and domain databases

    Gene3Di2.40.50.140. 2 hits.
    3.40.50.10190. 1 hit.
    InterProiIPR001357. BRCT_dom.
    IPR000977. DNA_ligase_ATP-dep.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF00533. BRCT. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view]
    SMARTiSM00292. BRCT. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 2 hits.
    SSF52113. SSF52113. 2 hits.
    TIGRFAMsiTIGR00574. dnl1. 1 hit.
    PROSITEiPS50172. BRCT. 2 hits.
    PS00697. DNA_LIGASE_A1. 1 hit.
    PS00333. DNA_LIGASE_A2. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    G8ZY51-1 [UniParc]FASTAAdd to Basket

    « Hide

    MESAEILTST HEVSQELQES ESTEKAPPNF APSPDFIWLC EELFVKLEDV    50
    QRQGREHLGN KPLSVRYYEV ISHFIRLWRK TVGNNIFPAL VLSLPYRDRR 100
    IYNIKDYTLV KAICSYLALP KQSATEKRLL KWKRRATRGV RLSNFCVEEI 150
    RKRKSEPSPG RRITIDKLNE CLDHLVEERN AKGGFKGLSD SPTFNFCLQN 200
    MSFIELRFFF DIVLKNRVIG GQEHKLLNCW HPDALDYLSV VSDLETVASR 250
    LWDPEHRLRR DDLSINLGYA FVPQLAKKMT ISYEKICTKL NNDFLIEEKM 300
    DGERIQVHYM DYGAKIRFLS RRGVDYTQLY GENLQSGTVA NYLNFDSNVR 350
    DCVLDGEMIT FDTDRNVVLP FGMVKSSARQ ALSTEGICSQ GHRPMLMVLD 400
    LVYLNGVSLI KLPLYQRKEF LNRVLKPCPH AVEILPYVRC SEHTAIRKSL 450
    EKSISMGSEG IVLKSYKARY EIGARNDYWI KVKPEYLEQF GENLDLVIIG 500
    RTPGKKDSLM CGLAVYEGEE DLNEIEAKRE SAIVNLDSEG DELDDTDGKK 550
    IIKYFISFCV IANGISQQEF KEIDRKTRGA WVKSDQRLPS ADLLRFGSKI 600
    PEEWIDPKNS IMLEVKARSL DNTESSKKKF AAGCTLHGGY CRRIRDDKDW 650
    TGCYSFSELW QERLHKSSTG VGSFNKQYSK KMKSKKRKID PFSGQAAKKH 700
    DVFDSTNIFK GLQFYVLSDY IDVSRNVRIT KSEFDDLILQ NSGKLVRNLI 750
    SKHHSESQFR IISGKYTAEC RALIERGYDI LSPQWILDCI RNRMVVKLEP 800
    RHCFNVSSEL MTIVNGRVDE YGDSFVNPIT EQQLDNLIDT NMKQTEPNLM 850
    REANSELDVV PLFLFSTRAV YIPPQVFNAV DAYGLTSKFK LHGGSIASDI 900
    PSCNLIIMPN ENQRLGTQSL VEMRQSVLQA MGRNDSTPSI PYIVTPDWVE 950
    KSIEENCQVP EEDFTPVYA 969
    Length:969
    Mass (Da):111,242
    Last modified:February 22, 2012 - v1
    Checksum:iBE41935B409BD40B
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    HE616748 Genomic DNA. Translation: CCE93818.1.
    RefSeqiXP_003683029.1. XM_003682981.1.

    Genome annotation databases

    GeneIDi11505191.
    KEGGitdl:TDEL_0G04510.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    HE616748 Genomic DNA. Translation: CCE93818.1 .
    RefSeqi XP_003683029.1. XM_003682981.1.

    3D structure databases

    ProteinModelPortali G8ZY51.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 11505191.
    KEGGi tdl:TDEL_0G04510.

    Phylogenomic databases

    KOi K10777.
    OrthoDBi EOG7QC84G.

    Family and domain databases

    Gene3Di 2.40.50.140. 2 hits.
    3.40.50.10190. 1 hit.
    InterProi IPR001357. BRCT_dom.
    IPR000977. DNA_ligase_ATP-dep.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF00533. BRCT. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view ]
    SMARTi SM00292. BRCT. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 2 hits.
    SSF52113. SSF52113. 2 hits.
    TIGRFAMsi TIGR00574. dnl1. 1 hit.
    PROSITEi PS50172. BRCT. 2 hits.
    PS00697. DNA_LIGASE_A1. 1 hit.
    PS00333. DNA_LIGASE_A2. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Evolutionary erosion of yeast sex chromosomes by mating-type switching accidents."
      Gordon J.L., Armisen D., Proux-Wera E., OhEigeartaigh S.S., Byrne K.P., Wolfe K.H.
      Proc. Natl. Acad. Sci. U.S.A. 108:20024-20029(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 10662 / CBS 1146 / NBRC 0425 / NCYC 2629 / NRRL Y-866Imported.

    Entry informationi

    Entry nameiG8ZY51_TORDC
    AccessioniPrimary (citable) accession number: G8ZY51
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 22, 2012
    Last sequence update: February 22, 2012
    Last modified: October 1, 2014
    This is version 14 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3