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G8ZY51 (G8ZY51_TORDC) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length969 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).

Sequence similarities

Belongs to the ATP-dependent DNA ligase family. RuleBase RU004196

Sequences

Sequence LengthMass (Da)Tools
G8ZY51 [UniParc].

Last modified February 22, 2012. Version 1.
Checksum: BE41935B409BD40B

FASTA969111,242
        10         20         30         40         50         60 
MESAEILTST HEVSQELQES ESTEKAPPNF APSPDFIWLC EELFVKLEDV QRQGREHLGN 

        70         80         90        100        110        120 
KPLSVRYYEV ISHFIRLWRK TVGNNIFPAL VLSLPYRDRR IYNIKDYTLV KAICSYLALP 

       130        140        150        160        170        180 
KQSATEKRLL KWKRRATRGV RLSNFCVEEI RKRKSEPSPG RRITIDKLNE CLDHLVEERN 

       190        200        210        220        230        240 
AKGGFKGLSD SPTFNFCLQN MSFIELRFFF DIVLKNRVIG GQEHKLLNCW HPDALDYLSV 

       250        260        270        280        290        300 
VSDLETVASR LWDPEHRLRR DDLSINLGYA FVPQLAKKMT ISYEKICTKL NNDFLIEEKM 

       310        320        330        340        350        360 
DGERIQVHYM DYGAKIRFLS RRGVDYTQLY GENLQSGTVA NYLNFDSNVR DCVLDGEMIT 

       370        380        390        400        410        420 
FDTDRNVVLP FGMVKSSARQ ALSTEGICSQ GHRPMLMVLD LVYLNGVSLI KLPLYQRKEF 

       430        440        450        460        470        480 
LNRVLKPCPH AVEILPYVRC SEHTAIRKSL EKSISMGSEG IVLKSYKARY EIGARNDYWI 

       490        500        510        520        530        540 
KVKPEYLEQF GENLDLVIIG RTPGKKDSLM CGLAVYEGEE DLNEIEAKRE SAIVNLDSEG 

       550        560        570        580        590        600 
DELDDTDGKK IIKYFISFCV IANGISQQEF KEIDRKTRGA WVKSDQRLPS ADLLRFGSKI 

       610        620        630        640        650        660 
PEEWIDPKNS IMLEVKARSL DNTESSKKKF AAGCTLHGGY CRRIRDDKDW TGCYSFSELW 

       670        680        690        700        710        720 
QERLHKSSTG VGSFNKQYSK KMKSKKRKID PFSGQAAKKH DVFDSTNIFK GLQFYVLSDY 

       730        740        750        760        770        780 
IDVSRNVRIT KSEFDDLILQ NSGKLVRNLI SKHHSESQFR IISGKYTAEC RALIERGYDI 

       790        800        810        820        830        840 
LSPQWILDCI RNRMVVKLEP RHCFNVSSEL MTIVNGRVDE YGDSFVNPIT EQQLDNLIDT 

       850        860        870        880        890        900 
NMKQTEPNLM REANSELDVV PLFLFSTRAV YIPPQVFNAV DAYGLTSKFK LHGGSIASDI 

       910        920        930        940        950        960 
PSCNLIIMPN ENQRLGTQSL VEMRQSVLQA MGRNDSTPSI PYIVTPDWVE KSIEENCQVP 


EEDFTPVYA 

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References

[1]"Evolutionary erosion of yeast sex chromosomes by mating-type switching accidents."
Gordon J.L., Armisen D., Proux-Wera E., OhEigeartaigh S.S., Byrne K.P., Wolfe K.H.
Proc. Natl. Acad. Sci. U.S.A. 108:20024-20029(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 10662 / CBS 1146 / NBRC 0425 / NCYC 2629 / NRRL Y-866.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
HE616748 Genomic DNA. Translation: CCE93818.1.
RefSeqXP_003683029.1. XM_003682981.1.

3D structure databases

ProteinModelPortalG8ZY51.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID11505191.
KEGGtdl:TDEL_0G04510.

Phylogenomic databases

KOK10777.
OrthoDBEOG7QC84G.

Family and domain databases

Gene3D2.40.50.140. 2 hits.
3.40.50.10190. 1 hit.
InterProIPR001357. BRCT_dom.
IPR000977. DNA_ligase_ATP-dep.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF00533. BRCT. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SMARTSM00292. BRCT. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 2 hits.
SSF52113. SSF52113. 2 hits.
TIGRFAMsTIGR00574. dnl1. 1 hit.
PROSITEPS50172. BRCT. 2 hits.
PS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameG8ZY51_TORDC
AccessionPrimary (citable) accession number: G8ZY51
Entry history
Integrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: November 13, 2013
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)