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G8ZRF1 (G8ZRF1_TORDC) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 12. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length705 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m). RuleBase RU000617

Sequence similarities

Belongs to the ATP-dependent DNA ligase family.

Sequences

Sequence LengthMass (Da)Tools
G8ZRF1 [UniParc].

Last modified February 22, 2012. Version 1.
Checksum: 39C39F49AD819B0B

FASTA70579,333
        10         20         30         40         50         60 
MFRVVGRPLV ELLINKGMSS GKKQATLARF FSAVQKDDTK EKVNGDVKII ESRDNQDEPV 

        70         80         90        100        110        120 
TKKFKSSSPV KLQTSSLSPV KSAGVESGDK PVSPDLYYSK VPYSDVCNVF QEIEGTSSRL 

       130        140        150        160        170        180 
SIIKICSEFF SRIMKDNPQN LIPTTYLFIN RLGPDYEPGL ELGLGEGLLM KTISEACGKS 

       190        200        210        220        230        240 
LVQVKNRYRE MGDLGQIALE ARNVQPTMFK PKPLTVGEVF ENLRAIAHSQ GKDSQTRKIK 

       250        260        270        280        290        300 
LIKRMLTACE GVEAKFLIRS LESKLRIGLA EKTVLISLSK ALLTNEGETG KEPSMELVEQ 

       310        320        330        340        350        360 
AEAKIRDAFC QVPNYEIVIN ACLDYGIMEL DKHCRLRPGI PLKPMLAKPT KSITEVLDRF 

       370        380        390        400        410        420 
QGQTFTSEYK YDGERAQVHL LEDGTMRIYS RNGENMTERY PEISIRDFVA DLEHTKTLIL 

       430        440        450        460        470        480 
DCEAVAWDKV QQKILPFQVL STRKRKDVEA KDVKVRVCLF AFDIICHNGE RQINKSLRER 

       490        500        510        520        530        540 
RELLAQVTKP VAGEFQYAVE LTTSSVEELQ KFLDQSVKDS CEGLMVKMLD GPESHYEPSK 

       550        560        570        580        590        600 
RSRNWLKLKK DYLDGVGDSL DLCVLGAYYG RGKRTGTYGG FLLGCYNQDS GEFETCCKIG 

       610        620        630        640        650        660 
TGFSDEMLQQ LYERFSKTTL DGPKATYVFD SSAEPDVWFE PTTLFEVLTA DLSLSPVYKA 

       670        680        690        700 
GASTYDKGVS LRFPRFVRLR DDKSVEDATS SAQIVELYQD QSHVA 

« Hide

References

[1]"Evolutionary erosion of yeast sex chromosomes by mating-type switching accidents."
Gordon J.L., Armisen D., Proux-Wera E., OhEigeartaigh S.S., Byrne K.P., Wolfe K.H.
Proc. Natl. Acad. Sci. U.S.A. 108:20024-20029(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 10662 / CBS 1146 / NBRC 0425 / NCYC 2629 / NRRL Y-866.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
HE616744 Genomic DNA. Translation: CCE91093.1.
RefSeqXP_003680304.1. XM_003680256.1.

3D structure databases

ProteinModelPortalG8ZRF1.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID11500428.
KEGGtdl:TDEL_0C02040.

Phylogenomic databases

KOK10747.
OrthoDBEOG7TXKRG.

Family and domain databases

Gene3D1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProIPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR00574. dnl1. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameG8ZRF1_TORDC
AccessionPrimary (citable) accession number: G8ZRF1
Entry history
Integrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: November 13, 2013
This is version 12 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)