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Protein

Superoxide dismutase

Gene

FCOL_09090

Organism
Flavobacterium columnare (strain ATCC 49512 / CIP 103533 / TG 44/87)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

GO - Molecular functioni

  1. metal ion binding Source: InterPro
  2. superoxide dismutase activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotation

Enzyme and pathway databases

BioCyciFCOL1041826:GHZN-1848-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:FCOL_09090Imported
OrganismiFlavobacterium columnare (strain ATCC 49512 / CIP 103533 / TG 44/87)Imported
Taxonomic identifieri1041826 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesFlavobacteriiaFlavobacterialesFlavobacteriaceaeFlavobacterium
ProteomesiUP000005638: Chromosome

Structurei

3D structure databases

ProteinModelPortaliG8XAF6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

Phylogenomic databases

KOiK04564.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

G8XAF6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAFELPQLPY AYDALEPHID ARTMEIHHTK HHNAYTTNLN AAIAGTELEG
60 70 80 90 100
KSIEEILKNL DMTKAAIRNN GGGFYNHNLF WTVMSPNGGG EPTGELAEAI
110 120 130 140 150
DSAFGSFGAF KEAFTKAGAT QFGSGWAWLC VKEGKLEVCA TANQDNTLMP
160 170 180 190 200
GIGCGGTPIL GMDMWEHAYY LNYQNRRPDY MEAFFNVINW AEVTKRYNEA

K
Length:201
Mass (Da):22,296
Last modified:February 22, 2012 - v1
Checksum:i1B56D350B9B607A4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003222 Genomic DNA. Translation: AEW86627.1.
RefSeqiYP_004942420.1. NC_016510.2.

Genome annotation databases

EnsemblBacteriaiAEW86627; AEW86627; FCOL_09090.
GeneIDi11476904.
KEGGifco:FCOL_09090.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003222 Genomic DNA. Translation: AEW86627.1.
RefSeqiYP_004942420.1. NC_016510.2.

3D structure databases

ProteinModelPortaliG8XAF6.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEW86627; AEW86627; FCOL_09090.
GeneIDi11476904.
KEGGifco:FCOL_09090.

Phylogenomic databases

KOiK04564.

Enzyme and pathway databases

BioCyciFCOL1041826:GHZN-1848-MONOMER.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequence of Flavobacterium columnare ATCC 49512."
    Tekedar H.C., Karsi A., Gillaspy A.F., Dyer D., Benton N.R., Zaitshik J., Vamenta S., Banes M.M., Gulsoy N., Aboko-Cole M., Waldbieser G.C., Lawrence M.L.
    Submitted (DEC-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 49512 / CIP 103533 / TG 44/87Imported.

Entry informationi

Entry nameiG8XAF6_FLACA
AccessioniPrimary (citable) accession number: G8XAF6
Entry historyi
Integrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: January 7, 2015
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.