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G8WVS0

- G8WVS0_STREN

UniProt

G8WVS0 - G8WVS0_STREN

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Protein
Submitted name:

DNA polymerase LigD ligase subunit

Gene

SCATT_54560

Organism
Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
DNA polymerase LigD ligase subunitImported
Gene namesi
Ordered Locus Names:SCATT_54560Imported
OrganismiStreptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057)Imported
Taxonomic identifieri1003195 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesStreptomycineaeStreptomycetaceaeStreptomyces
ProteomesiUP000007842: Chromosome

Structurei

3D structure databases

ProteinModelPortaliG8WVS0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

G8WVS0-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MDAAHHRRPR PDDPVPDRVT PMLAVLSDRR HFDDTWVLER KLDGVRAIGF
60 70 80 90 100
RDGDTVRLAS RTGQRLENTY PEIVRALADQ PQRAFVVDGE IVALDDGRTS
110 120 130 140 150
FERLQRRMQL TRPSAALASG VAVTYFLFDL LHLAGHDTTG LPLRSRKELL
160 170 180 190 200
REAVRYTGPL RYTEHHTATG DAGQLLDAAC AQGWEGLIAK RADGRYQQRR
210 220 230 240 250
SSDWLKLKCL TAQEFVVGGY TEPAGSRAGF GALLLGYHQG GRLRYAGKVG
260 270 280 290 300
TGYDTATLRR LRGLLDERGL TEPPFAEPVR ERGAHWVRPD LVVQVAFTEW
310 320
TRDGRLRAPR YLGLRQDKRP ERVVREG
Length:327
Mass (Da):36,855
Last modified:February 22, 2012 - v1
Checksum:iC9364AB867E8681F
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003219 Genomic DNA. Translation: AEW97827.1.
RefSeqiWP_014628695.1. NC_017586.1.
YP_006057349.1. NC_017586.1.

Genome annotation databases

EnsemblBacteriaiAEW97827; AEW97827; SCATT_54560.
GeneIDi12652226.
KEGGiscy:SCATT_54560.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003219 Genomic DNA. Translation: AEW97827.1 .
RefSeqi WP_014628695.1. NC_017586.1.
YP_006057349.1. NC_017586.1.

3D structure databases

ProteinModelPortali G8WVS0.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEW97827 ; AEW97827 ; SCATT_54560 .
GeneIDi 12652226.
KEGGi scy:SCATT_54560.

Phylogenomic databases

KOi K01971.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete genome sequence of Streptomyces cattleya strain DSM 46488."
    Ou H.-Y., Li P., Zhao C., O'Hagan D., Deng Z.
    Submitted (DEC-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057Imported.

Entry informationi

Entry nameiG8WVS0_STREN
AccessioniPrimary (citable) accession number: G8WVS0
Entry historyi
Integrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: October 29, 2014
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3