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Protein

Xylose isomerase

Gene

xylA

Organism
Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Catalytic activityi

D-xylopyranose = D-xylulose.UniRule annotationSAAS annotation

Cofactori

Mg2+UniRule annotationNote: Binds 2 magnesium ions per subunit.UniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei107UniRule annotation1
Active sitei110UniRule annotation1
Metal bindingi238Magnesium 1UniRule annotation1
Metal bindingi274Magnesium 1UniRule annotation1
Metal bindingi274Magnesium 2UniRule annotation1
Metal bindingi277Magnesium 2UniRule annotation1
Metal bindingi302Magnesium 1UniRule annotation1
Metal bindingi313Magnesium 2UniRule annotation1
Metal bindingi315Magnesium 2UniRule annotation1
Metal bindingi345Magnesium 1UniRule annotation1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionIsomeraseUniRule annotationSAAS annotationImported
Biological processCarbohydrate metabolism, Xylose metabolismUniRule annotationSAAS annotation
LigandMagnesiumUniRule annotationSAAS annotation, Metal-bindingUniRule annotationSAAS annotation

Enzyme and pathway databases

BioCyciNKOR700598:G1H35-949-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Xylose isomeraseUniRule annotationSAAS annotation (EC:5.3.1.5UniRule annotationSAAS annotation)
Gene namesi
Name:xylAUniRule annotation
Ordered Locus Names:Niako_0966Imported
OrganismiNiastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10)Imported
Taxonomic identifieri700598 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesChitinophagiaChitinophagalesChitinophagaceaeNiastella
Proteomesi
  • UP000005438 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm UniRule annotationSAAS annotation

GO - Cellular componenti

Keywords - Cellular componenti

CytoplasmUniRule annotationSAAS annotation

Interactioni

Subunit structurei

Homotetramer.UniRule annotationSAAS annotation

Protein-protein interaction databases

STRINGi700598.Niako_0966

Structurei

3D structure databases

ProteinModelPortaliG8TFD5
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the xylose isomerase family.UniRule annotationSAAS annotation

Phylogenomic databases

eggNOGiENOG4105C93 Bacteria
COG2115 LUCA
KOiK01805
OMAiHTFQHEL
OrthoDBiPOG091H07LC

Family and domain databases

HAMAPiMF_00455 Xylose_isom_A, 1 hit
InterProiView protein in InterPro
IPR036237 Xyl_isomerase-like_sf
IPR013452 Xylose_isom_bac
IPR001998 Xylose_isomerase
PANTHERiPTHR32176:SF0 PTHR32176:SF0, 1 hit
PRINTSiPR00688 XYLOSISMRASE
SUPFAMiSSF51658 SSF51658, 1 hit
TIGRFAMsiTIGR02630 xylose_isom_A, 1 hit
PROSITEiView protein in PROSITE
PS51415 XYLOSE_ISOMERASE, 1 hit

Sequencei

Sequence statusi: Complete.

G8TFD5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKIITGEKEF FKGIGQIKYE GVESDNPLAF KWYDENRVVA GKTMKEHLRF
60 70 80 90 100
AVCYWHTFCN TGADPFGPGT KHFAWDANTD AVARAKDKMD AAFEFITKLG
110 120 130 140 150
VPYYCFHDID LVDEGANIKE YESRLQTIVD YAKQKQAASG VKLLWGTANV
160 170 180 190 200
FSNPRYMNGA STNPDFAAVA YAGTQVKNAL DATIALGGEN YVFWGGREGY
210 220 230 240 250
MSLLNTNMKR ELDHLAQFLT MARDYARKQG FKGVFFIEPK PCEPTKHQYD
260 270 280 290 300
YDSATVIGFL RHYGLDKDFK LNIEVNHATL AGHTFQHELQ VAADAGMLGS
310 320 330 340 350
IDANRGDDQN GWDTDQFPVD LNELVESMLI ILEAKGFAGG GINFDAKTRR
360 370 380 390 400
NSTDLEDIFM AHIGGMDTFA RALVIADKVM QKSPYLKFRK DRYASFDSGK
410 420 430 440
GKEFETGALK LEDLREFALS NGEPKQTSGK QEWLENIINQ YI
Length:442
Mass (Da):49,681
Last modified:February 22, 2012 - v1
Checksum:i62A43C00587DD2AC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003178 Genomic DNA Translation: AEV97345.1
RefSeqiWP_014217259.1, NC_016609.1

Genome annotation databases

EnsemblBacteriaiAEV97345; AEV97345; Niako_0966
KEGGinko:Niako_0966
PATRICifig|700598.3.peg.987

Similar proteinsi

Entry informationi

Entry nameiG8TFD5_NIAKG
AccessioniPrimary (citable) accession number: G8TFD5
Entry historyiIntegrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: April 25, 2018
This is version 45 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
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Main funding by: National Institutes of Health