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G8TFD5

- G8TFD5_NIAKG

UniProt

G8TFD5 - G8TFD5_NIAKG

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Protein
Xylose isomerase
Gene
xylA, Niako_0966
Organism
Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

D-xylopyranose = D-xylulose.UniRule annotationSAAS annotations

Cofactori

Binds 2 magnesium ions per subunit By similarity.UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei107 – 1071 By similarityUniRule annotation
Active sitei110 – 1101 By similarityUniRule annotation
Metal bindingi238 – 2381Magnesium 1 By similarityUniRule annotation
Metal bindingi274 – 2741Magnesium 1 By similarityUniRule annotation
Metal bindingi274 – 2741Magnesium 2 By similarityUniRule annotation
Metal bindingi277 – 2771Magnesium 2 By similarityUniRule annotation
Metal bindingi302 – 3021Magnesium 1 By similarityUniRule annotation
Metal bindingi313 – 3131Magnesium 2 By similarityUniRule annotation
Metal bindingi315 – 3151Magnesium 2 By similarityUniRule annotation
Metal bindingi345 – 3451Magnesium 1 By similarityUniRule annotation

GO - Molecular functioni

  1. magnesium ion binding Source: UniProtKB-HAMAP
  2. xylose isomerase activity Source: UniProtKB-HAMAP
Complete GO annotation...

GO - Biological processi

  1. D-xylose metabolic process Source: UniProtKB-HAMAP
  2. pentose-phosphate shunt Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

IsomeraseUniRule annotationSAAS annotationsImported

Keywords - Biological processi

Carbohydrate metabolism, Pentose shuntUniRule annotationSAAS annotations, Xylose metabolismUniRule annotationSAAS annotations

Keywords - Ligandi

MagnesiumUniRule annotationSAAS annotations, Metal-bindingUniRule annotationSAAS annotations

Enzyme and pathway databases

BioCyciNKOR700598:GHC3-975-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Xylose isomeraseUniRule annotation (EC:5.3.1.5UniRule annotation)
Gene namesi
Name:xylAUniRule annotation
Ordered Locus Names:Niako_0966Imported
OrganismiNiastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10)Imported
Taxonomic identifieri700598 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesSphingobacteriiaSphingobacterialesChitinophagaceaeNiastella
ProteomesiUP000005438: Chromosome

Subcellular locationi

Cytoplasm By similarity UniRule annotationSAAS annotations

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

CytoplasmUniRule annotationSAAS annotations

Interactioni

Subunit structurei

Homotetramer By similarity.UniRule annotationSAAS annotations

Structurei

3D structure databases

ProteinModelPortaliG8TFD5.

Family & Domainsi

Sequence similaritiesi

Belongs to the xylose isomerase family.UniRule annotation

Phylogenomic databases

KOiK01805.
OMAiLFHAHIG.

Family and domain databases

Gene3Di3.20.20.150. 1 hit.
HAMAPiMF_00455. Xylose_isom_A.
InterProiIPR013022. Xyl_isomerase-like_TIM-brl.
IPR013452. Xylose_isom_bac.
IPR001998. Xylose_isomerase.
[Graphical view]
PfamiPF01261. AP_endonuc_2. 1 hit.
[Graphical view]
PRINTSiPR00688. XYLOSISMRASE.
SUPFAMiSSF51658. SSF51658. 1 hit.
TIGRFAMsiTIGR02630. xylose_isom_A. 1 hit.
PROSITEiPS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

G8TFD5-1 [UniParc]FASTAAdd to Basket

« Hide

MKIITGEKEF FKGIGQIKYE GVESDNPLAF KWYDENRVVA GKTMKEHLRF    50
AVCYWHTFCN TGADPFGPGT KHFAWDANTD AVARAKDKMD AAFEFITKLG 100
VPYYCFHDID LVDEGANIKE YESRLQTIVD YAKQKQAASG VKLLWGTANV 150
FSNPRYMNGA STNPDFAAVA YAGTQVKNAL DATIALGGEN YVFWGGREGY 200
MSLLNTNMKR ELDHLAQFLT MARDYARKQG FKGVFFIEPK PCEPTKHQYD 250
YDSATVIGFL RHYGLDKDFK LNIEVNHATL AGHTFQHELQ VAADAGMLGS 300
IDANRGDDQN GWDTDQFPVD LNELVESMLI ILEAKGFAGG GINFDAKTRR 350
NSTDLEDIFM AHIGGMDTFA RALVIADKVM QKSPYLKFRK DRYASFDSGK 400
GKEFETGALK LEDLREFALS NGEPKQTSGK QEWLENIINQ YI 442
Length:442
Mass (Da):49,681
Last modified:February 22, 2012 - v1
Checksum:i62A43C00587DD2AC
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003178 Genomic DNA. Translation: AEV97345.1.
RefSeqiYP_005006749.1. NC_016609.1.

Genome annotation databases

EnsemblBacteriaiAEV97345; AEV97345; Niako_0966.
GeneIDi11652706.
KEGGinko:Niako_0966.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003178 Genomic DNA. Translation: AEV97345.1 .
RefSeqi YP_005006749.1. NC_016609.1.

3D structure databases

ProteinModelPortali G8TFD5.
ModBasei Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEV97345 ; AEV97345 ; Niako_0966 .
GeneIDi 11652706.
KEGGi nko:Niako_0966.

Phylogenomic databases

KOi K01805.
OMAi LFHAHIG.

Enzyme and pathway databases

BioCyci NKOR700598:GHC3-975-MONOMER.

Family and domain databases

Gene3Di 3.20.20.150. 1 hit.
HAMAPi MF_00455. Xylose_isom_A.
InterProi IPR013022. Xyl_isomerase-like_TIM-brl.
IPR013452. Xylose_isom_bac.
IPR001998. Xylose_isomerase.
[Graphical view ]
Pfami PF01261. AP_endonuc_2. 1 hit.
[Graphical view ]
PRINTSi PR00688. XYLOSISMRASE.
SUPFAMi SSF51658. SSF51658. 1 hit.
TIGRFAMsi TIGR02630. xylose_isom_A. 1 hit.
PROSITEi PS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 17620 / KACC 11465 / GR20-10.

Entry informationi

Entry nameiG8TFD5_NIAKG
AccessioniPrimary (citable) accession number: G8TFD5
Entry historyi
Integrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: June 11, 2014
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

Similar proteinsi