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G8TFD5

- G8TFD5_NIAKG

UniProt

G8TFD5 - G8TFD5_NIAKG

Protein

Xylose isomerase

Gene

xylA

Organism
Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 18 (01 Oct 2014)
      Sequence version 1 (22 Feb 2012)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    D-xylopyranose = D-xylulose.UniRule annotationSAAS annotation

    Cofactori

    Binds 2 magnesium ions per subunit.UniRule annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei107 – 1071UniRule annotation
    Active sitei110 – 1101UniRule annotation
    Metal bindingi238 – 2381Magnesium 1UniRule annotation
    Metal bindingi274 – 2741Magnesium 1UniRule annotation
    Metal bindingi274 – 2741Magnesium 2UniRule annotation
    Metal bindingi277 – 2771Magnesium 2UniRule annotation
    Metal bindingi302 – 3021Magnesium 1UniRule annotation
    Metal bindingi313 – 3131Magnesium 2UniRule annotation
    Metal bindingi315 – 3151Magnesium 2UniRule annotation
    Metal bindingi345 – 3451Magnesium 1UniRule annotation

    GO - Molecular functioni

    1. magnesium ion binding Source: UniProtKB-HAMAP
    2. xylose isomerase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. D-xylose metabolic process Source: UniProtKB-HAMAP
    2. pentose-phosphate shunt Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    IsomeraseUniRule annotationSAAS annotationImported

    Keywords - Biological processi

    Carbohydrate metabolism, Pentose shuntUniRule annotationSAAS annotation, Xylose metabolismUniRule annotationSAAS annotation

    Keywords - Ligandi

    MagnesiumUniRule annotationSAAS annotation, Metal-bindingUniRule annotationSAAS annotation

    Enzyme and pathway databases

    BioCyciNKOR700598:GHC3-975-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Xylose isomeraseUniRule annotation (EC:5.3.1.5UniRule annotation)
    Gene namesi
    Name:xylAUniRule annotation
    Ordered Locus Names:Niako_0966Imported
    OrganismiNiastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10)Imported
    Taxonomic identifieri700598 [NCBI]
    Taxonomic lineageiBacteriaBacteroidetesSphingobacteriiaSphingobacterialesChitinophagaceaeNiastella
    ProteomesiUP000005438: Chromosome

    Subcellular locationi

    Cytoplasm UniRule annotationSAAS annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    CytoplasmUniRule annotationSAAS annotation

    Interactioni

    Subunit structurei

    Homotetramer.UniRule annotationSAAS annotation

    Structurei

    3D structure databases

    ProteinModelPortaliG8TFD5.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the xylose isomerase family.UniRule annotation

    Phylogenomic databases

    KOiK01805.
    OMAiLFHAHIG.

    Family and domain databases

    Gene3Di3.20.20.150. 1 hit.
    HAMAPiMF_00455. Xylose_isom_A.
    InterProiIPR013022. Xyl_isomerase-like_TIM-brl.
    IPR013452. Xylose_isom_bac.
    IPR001998. Xylose_isomerase.
    [Graphical view]
    PfamiPF01261. AP_endonuc_2. 1 hit.
    [Graphical view]
    PRINTSiPR00688. XYLOSISMRASE.
    SUPFAMiSSF51658. SSF51658. 1 hit.
    TIGRFAMsiTIGR02630. xylose_isom_A. 1 hit.
    PROSITEiPS51415. XYLOSE_ISOMERASE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    G8TFD5-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKIITGEKEF FKGIGQIKYE GVESDNPLAF KWYDENRVVA GKTMKEHLRF    50
    AVCYWHTFCN TGADPFGPGT KHFAWDANTD AVARAKDKMD AAFEFITKLG 100
    VPYYCFHDID LVDEGANIKE YESRLQTIVD YAKQKQAASG VKLLWGTANV 150
    FSNPRYMNGA STNPDFAAVA YAGTQVKNAL DATIALGGEN YVFWGGREGY 200
    MSLLNTNMKR ELDHLAQFLT MARDYARKQG FKGVFFIEPK PCEPTKHQYD 250
    YDSATVIGFL RHYGLDKDFK LNIEVNHATL AGHTFQHELQ VAADAGMLGS 300
    IDANRGDDQN GWDTDQFPVD LNELVESMLI ILEAKGFAGG GINFDAKTRR 350
    NSTDLEDIFM AHIGGMDTFA RALVIADKVM QKSPYLKFRK DRYASFDSGK 400
    GKEFETGALK LEDLREFALS NGEPKQTSGK QEWLENIINQ YI 442
    Length:442
    Mass (Da):49,681
    Last modified:February 22, 2012 - v1
    Checksum:i62A43C00587DD2AC
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003178 Genomic DNA. Translation: AEV97345.1.
    RefSeqiYP_005006749.1. NC_016609.1.

    Genome annotation databases

    EnsemblBacteriaiAEV97345; AEV97345; Niako_0966.
    GeneIDi11652706.
    KEGGinko:Niako_0966.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003178 Genomic DNA. Translation: AEV97345.1 .
    RefSeqi YP_005006749.1. NC_016609.1.

    3D structure databases

    ProteinModelPortali G8TFD5.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEV97345 ; AEV97345 ; Niako_0966 .
    GeneIDi 11652706.
    KEGGi nko:Niako_0966.

    Phylogenomic databases

    KOi K01805.
    OMAi LFHAHIG.

    Enzyme and pathway databases

    BioCyci NKOR700598:GHC3-975-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.150. 1 hit.
    HAMAPi MF_00455. Xylose_isom_A.
    InterProi IPR013022. Xyl_isomerase-like_TIM-brl.
    IPR013452. Xylose_isom_bac.
    IPR001998. Xylose_isomerase.
    [Graphical view ]
    Pfami PF01261. AP_endonuc_2. 1 hit.
    [Graphical view ]
    PRINTSi PR00688. XYLOSISMRASE.
    SUPFAMi SSF51658. SSF51658. 1 hit.
    TIGRFAMsi TIGR02630. xylose_isom_A. 1 hit.
    PROSITEi PS51415. XYLOSE_ISOMERASE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DSM 17620 / KACC 11465 / GR20-10Imported.

    Entry informationi

    Entry nameiG8TFD5_NIAKG
    AccessioniPrimary (citable) accession number: G8TFD5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 22, 2012
    Last sequence update: February 22, 2012
    Last modified: October 1, 2014
    This is version 18 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3