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G8TCN8 (G8TCN8_NIAKG) Unreviewed, UniProtKB/TrEMBL

Last modified May 29, 2013. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Beta-galactosidase RuleBase RU000675
EC=3.2.1.23 RuleBase RU000675
Gene names
Ordered Locus Names:Niako_7276 EMBL AEW03492.1
OrganismNiastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) [Complete proteome] [HAMAP]
Taxonomic identifier700598 [NCBI]
Taxonomic lineageBacteria › Bacteroidetes › Sphingobacteriia › Sphingobacteriales › Chitinophagaceae › Niastella ›

Protein attributes

Sequence length619 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Hydrolysis of terminal non-reducing beta-D-galactose residues in beta-D-galactosides. RuleBase RU000675

Sequence similarities

Belongs to the glycosyl hydrolase 35 family. RuleBase RU003679

Ontologies

Keywords
   DomainSignal EMBL AEW03492.1
   Molecular functionGlycosidase RuleBase RU000675
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionbeta-galactosidase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2222 Potential EMBL AEW03492.1
Chain23 – 619597 Potential EMBL AEW03492.1
PRO_5000822288

Sequences

Sequence LengthMass (Da)Tools
G8TCN8 [UniParc].

Last modified February 22, 2012. Version 1.
Checksum: 8ACCCC6C516BEAE3

FASTA61969,855
        10         20         30         40         50         60 
MGINKRWVSG LLGILFTGTV IAQGNHTFEI KDGQFVYDSK PVQIHSGEMH YARIPAPYWR 

        70         80         90        100        110        120 
HRLQMIKAMG LNTVATYVFW NYHNPSPGVW DFTTGSHNIR EFLRIAREEG MFVILRPGPY 

       130        140        150        160        170        180 
ACAEWEFGGY PWWLLKDTSL VIRAYNQPFL DSCKTYINKL AEQVKDQLVS KGGPIIMVQV 

       190        200        210        220        230        240 
ENEFGSYVAQ RKDIPLAEHQ RYNEAIHQLL IKSGLTGPFF TSDGSWLFDG GSLPGVLPAA 

       250        260        270        280        290        300 
NGEGDVENLK KQVNKYHNNQ GPYMVAEYYP GWLHHWTEPF PNIPAKQVTD QLEIYLKGDV 

       310        320        330        340        350        360 
NFNVYMVHGG TNFAFTSGAN YDKDHDIQPD LTTYDYDAPI SEPGWATPKY LAVRELMKQY 

       370        380        390        400        410        420 
VKYPVPEIPA QIPVITLPPI QLSKSMDLFD WKKTIKPVVA DTPLTFEALN QGHGYVLYSK 

       430        440        450        460        470        480 
KFGQAVQGIL QINGLRDYAV VYVDGKNVAV LNRVNKHYTA TVEIAANSTL DILVENMGRI 

       490        500        510        520        530        540 
NYGSEIVHNN KGIISPVLIN EKAITGNWNM YKLPFTQQPV VNTGKQKEGK AALYSGTFTV 

       550        560        570        580        590        600 
TKPGDVFLDM HSWGKGIIFV NGHNLGRYWQ VGPQQTLYLP GCWLKTGTNN IVVFEQLNVG 

       610 
IKPEIPTVMK PLLKELKSE

« Hide

References

[1]"The complete genome of Niastella koreensis GR20-10."
US DOE Joint Genome Institute (JGI-PGF)
Lucas S., Han J., Lapidus A., Bruce D., Goodwin L., Pitluck S., Peters L., Kyrpides N., Mavromatis K., Ivanova N., Mikhailova N., Davenport K., Saunders E., Detter J.C., Tapia R., Han C., Land M., Hauser L. expand/collapse author list , Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Tindall B., Pomrenke H., Brambilla E., Klenk H.-P., Eisen J.A.
Submitted (DEC-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 17620 / KACC 11465 / GR20-10.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP003178 Genomic DNA. Translation: AEW03492.1.
RefSeqYP_005012895.1. NC_016609.1.

3D structure databases

ProteinModelPortalG8TCN8.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEW03492; AEW03492; Niako_7276.
GeneID11649326.
KEGGnko:Niako_7276.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK12308.

Enzyme and pathway databases

BioCycNKOR700598:GHC3-7355-MONOMER.

Family and domain databases

Gene3D2.60.120.260. 1 hit.
3.20.20.80. 1 hit.
InterProIPR026283. B-gal_1-like.
IPR008979. Galactose-bd-like.
IPR019801. Glyco_hydro_35_CS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR001944. Glycoside_Hdrlase_35.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR23421. PTHR23421. 1 hit.
PfamPF01301. Glyco_hydro_35. 1 hit.
[Graphical view]
PIRSFPIRSF006336. B-gal. 1 hit.
PRINTSPR00742. GLHYDRLASE35.
SUPFAMSSF49785. Gal_bind_like. 1 hit.
SSF51445. Glyco_hydro_cat. 1 hit.
PROSITEPS01182. GLYCOSYL_HYDROL_F35. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameG8TCN8_NIAKG
AccessionPrimary (citable) accession number: G8TCN8
Entry history
Integrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: May 29, 2013
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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