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G8T9W3

- G8T9W3_NIAKG

UniProt

G8T9W3 - G8T9W3_NIAKG

Protein
Submitted name:

ATP dependent DNA ligase

Gene

Niako_5068

Organism
Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 14 (01 Oct 2014)
      Sequence version 1 (22 Feb 2012)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciNKOR700598:GHC3-5119-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:Niako_5068Imported
    OrganismiNiastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10)Imported
    Taxonomic identifieri700598 [NCBI]
    Taxonomic lineageiBacteriaBacteroidetesSphingobacteriiaSphingobacterialesChitinophagaceaeNiastella
    ProteomesiUP000005438: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliG8T9W3.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.
    OMAiNRHKSGV.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    G8T9W3-1 [UniParc]FASTAAdd to Basket

    « Hide

    MREFAQLIFT LGTSTKTNDK LQALSTYFAH ADEKDKVWVI ALFSGRRPRR    50
    TVSGTQLAVW CCELVDLPIW LFQECYHTVG DLSETIALLI PESSSSPSIG 100
    GGRGEANREG ASHPLHYYVE QFQQLEKAAE PEKKTFILQS WQELSSRERF 150
    VFNKLLSGTF RVGVSQKLMV NALAKTVQLE PSVIAHRISG NWDPATTSFD 200
    QLLSEQSTQT DHSKPYPFYL AYALEDPLQE LGEPADWQAE WKWDGIRGQI 250
    IKRNDQLFVW SRGEDLITEK FPEYTILQRK LENGTVIDGE ILPYKDGQVL 300
    NFNVLQTRIG RKNIAKKNLQ EAPVGLFAYD LLELSGEDIR HWALAERRAA 350
    LETLVTSLQL PWLQLSPIVT FSNWEELTTI RKQSRSLNSE GLMLKRRASA 400
    YQVGRKRGDW WKWKIDPLTI DAVMVYAQKG TGRRSNLYTD YTFAVKDGDK 450
    LVPFTKAYSG LTDKEFAQVD SFVKKNSLEK FGPVRTVKPE LVFEIAFEGI 500
    ATSNRHKSGV ALRFPRISRW RTDKLPNDIN TLEDLKKILE LYGK 544
    Length:544
    Mass (Da):62,209
    Last modified:February 22, 2012 - v1
    Checksum:i0CF421FFB8443D59
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003178 Genomic DNA. Translation: AEW01307.1.
    RefSeqiYP_005010710.1. NC_016609.1.

    Genome annotation databases

    EnsemblBacteriaiAEW01307; AEW01307; Niako_5068.
    GeneIDi11651017.
    KEGGinko:Niako_5068.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003178 Genomic DNA. Translation: AEW01307.1 .
    RefSeqi YP_005010710.1. NC_016609.1.

    3D structure databases

    ProteinModelPortali G8T9W3.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEW01307 ; AEW01307 ; Niako_5068 .
    GeneIDi 11651017.
    KEGGi nko:Niako_5068.

    Phylogenomic databases

    KOi K01971.
    OMAi NRHKSGV.

    Enzyme and pathway databases

    BioCyci NKOR700598:GHC3-5119-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DSM 17620 / KACC 11465 / GR20-10Imported.

    Entry informationi

    Entry nameiG8T9W3_NIAKG
    AccessioniPrimary (citable) accession number: G8T9W3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 22, 2012
    Last sequence update: February 22, 2012
    Last modified: October 1, 2014
    This is version 14 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3