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G8T9W3

- G8T9W3_NIAKG

UniProt

G8T9W3 - G8T9W3_NIAKG

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Protein
Submitted name: ATP dependent DNA ligase
Gene
Niako_5068
Organism
Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciNKOR700598:GHC3-5119-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Niako_5068Imported
OrganismiNiastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10)Imported
Taxonomic identifieri700598 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesSphingobacteriiaSphingobacterialesChitinophagaceaeNiastella
ProteomesiUP000005438: Chromosome

Structurei

3D structure databases

ProteinModelPortaliG8T9W3.

Family & Domainsi

Phylogenomic databases

KOiK01971.
OMAiNRHKSGV.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

G8T9W3-1 [UniParc]FASTAAdd to Basket

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MREFAQLIFT LGTSTKTNDK LQALSTYFAH ADEKDKVWVI ALFSGRRPRR    50
TVSGTQLAVW CCELVDLPIW LFQECYHTVG DLSETIALLI PESSSSPSIG 100
GGRGEANREG ASHPLHYYVE QFQQLEKAAE PEKKTFILQS WQELSSRERF 150
VFNKLLSGTF RVGVSQKLMV NALAKTVQLE PSVIAHRISG NWDPATTSFD 200
QLLSEQSTQT DHSKPYPFYL AYALEDPLQE LGEPADWQAE WKWDGIRGQI 250
IKRNDQLFVW SRGEDLITEK FPEYTILQRK LENGTVIDGE ILPYKDGQVL 300
NFNVLQTRIG RKNIAKKNLQ EAPVGLFAYD LLELSGEDIR HWALAERRAA 350
LETLVTSLQL PWLQLSPIVT FSNWEELTTI RKQSRSLNSE GLMLKRRASA 400
YQVGRKRGDW WKWKIDPLTI DAVMVYAQKG TGRRSNLYTD YTFAVKDGDK 450
LVPFTKAYSG LTDKEFAQVD SFVKKNSLEK FGPVRTVKPE LVFEIAFEGI 500
ATSNRHKSGV ALRFPRISRW RTDKLPNDIN TLEDLKKILE LYGK 544
Length:544
Mass (Da):62,209
Last modified:February 22, 2012 - v1
Checksum:i0CF421FFB8443D59
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003178 Genomic DNA. Translation: AEW01307.1.
RefSeqiYP_005010710.1. NC_016609.1.

Genome annotation databases

EnsemblBacteriaiAEW01307; AEW01307; Niako_5068.
GeneIDi11651017.
KEGGinko:Niako_5068.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003178 Genomic DNA. Translation: AEW01307.1 .
RefSeqi YP_005010710.1. NC_016609.1.

3D structure databases

ProteinModelPortali G8T9W3.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEW01307 ; AEW01307 ; Niako_5068 .
GeneIDi 11651017.
KEGGi nko:Niako_5068.

Phylogenomic databases

KOi K01971.
OMAi NRHKSGV.

Enzyme and pathway databases

BioCyci NKOR700598:GHC3-5119-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 17620 / KACC 11465 / GR20-10.

Entry informationi

Entry nameiG8T9W3_NIAKG
AccessioniPrimary (citable) accession number: G8T9W3
Entry historyi
Integrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: May 14, 2014
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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