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G8T820 (G8T820_NIAKG) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 14. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Niako_0563 EMBL AEV96958.1
OrganismNiastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) [Complete proteome] [HAMAP] EMBL AEV96958.1
Taxonomic identifier700598 [NCBI]
Taxonomic lineageBacteriaBacteroidetesSphingobacteriiaSphingobacterialesChitinophagaceaeNiastella

Protein attributes

Sequence length390 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL AEV96958.1
   Molecular functionHydrolase EMBL AEV96958.1
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functionexo-alpha-sialidase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2727 Potential EMBL AEV96958.1
Chain28 – 390363 Potential EMBL AEV96958.1
PRO_5000821686

Sequences

Sequence LengthMass (Da)Tools
G8T820 [UniParc].

Last modified February 22, 2012. Version 1.
Checksum: E385C2253EC2CCBF

FASTA39042,692
        10         20         30         40         50         60 
MQRIINRYCF LVLVTLICAP NAVCAQAATK PDTLSLFVSG TNGYKSYRIP AIVTTTKGTL 

        70         80         90        100        110        120 
LAFCEGRKNN AADAGDIDLL LKRSTDGGRT WSKQQVIWND STNTCGNPCP VVDETTGTVC 

       130        140        150        160        170        180 
LLSTHNMGDD KEGDIIKKLS RSTRTVWIMK SNDDGLTWSV PENITATTKK KEWGWYATGP 

       190        200        210        220        230        240 
GIGIQIKNGP HKGRLVIPCD FSYDDSTTIP ATGHAAMGSH SIYSDDHGAT WKLGGTITPK 

       250        260        270        280        290        300 
MNECQVIEVA DGNGTLLMNM RSYFQRNCRA QAISYDGGIT WTAPADVPVL VEPVCQASIV 

       310        320        330        340        350        360 
RYAWPGKKTK STMLFLNPAS AKRMNMTIRA SYDEGQTWPV IRTLYAGPSA YSCMAILPNG 

       370        380        390 
TINCLYEAGN KNPYETIIFQ KLIAKELLNK 

« Hide

References

[1]"The complete genome of Niastella koreensis GR20-10."
US DOE Joint Genome Institute (JGI-PGF)
Lucas S., Han J., Lapidus A., Bruce D., Goodwin L., Pitluck S., Peters L., Kyrpides N., Mavromatis K., Ivanova N., Mikhailova N., Davenport K., Saunders E., Detter J.C., Tapia R., Han C., Land M., Hauser L. expand/collapse author list , Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Tindall B., Pomrenke H., Brambilla E., Klenk H.-P., Eisen J.A.
Submitted (DEC-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 17620 / KACC 11465 / GR20-10.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003178 Genomic DNA. Translation: AEV96958.1.
RefSeqYP_005006362.1. NC_016609.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEV96958; AEV96958; Niako_0563.
GeneID11652301.
KEGGnko:Niako_0563.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01186.
OMAFATSEVG.

Enzyme and pathway databases

BioCycNKOR700598:GHC3-570-MONOMER.

Family and domain databases

Gene3D2.120.10.10. 1 hit.
InterProIPR026856. Sialidase_fam.
IPR011040. Sialidases.
[Graphical view]
PANTHERPTHR10628. PTHR10628. 1 hit.
SUPFAMSSF50939. SSF50939. 1 hit.
ProtoNetSearch...

Entry information

Entry nameG8T820_NIAKG
AccessionPrimary (citable) accession number: G8T820
Entry history
Integrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: April 16, 2014
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)