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Protein
Submitted name:

ATP-dependent DNA ligase

Gene

ligC

Organism
Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciASP134676:GL7H-7055-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported (EC:6.5.1.1Imported)
Gene namesi
Name:ligCImported
Ordered Locus Names:ACPL_7071Imported
OrganismiActinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110)Imported
Taxonomic identifieri134676 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicromonosporineaeMicromonosporaceaeActinoplanes
ProteomesiUP000005440: Chromosome

Structurei

3D structure databases

ProteinModelPortaliG8SFG0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK01971.
OMAiHERTADC.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

G8SFG0-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MQLPIQHPVK PMLAKPVPEI PPGLIYEPKW DGFRSIIFRD GDEVEIGSRN
60 70 80 90 100
EKPMTRYFPE VVEAVLANFP ERAVIDGEVI VADTGRNTLD FEALQQRIHP
110 120 130 140 150
AASRVKLLSE QTPASFVAFD LLALGDEDLT ELPFEQRRER LRQALGQAEA
160 170 180 190 200
PVYVTPATDD TDTARRWFEE FEGAGLDGLI AKGRELTYQP DKRVMFKIKH
210 220 230 240 250
KRTADCVVAG YRVHKSAENR IGSLLLGLYD ERGVLASVGV IGSFPMKVRE
260 270 280 290 300
ELFDQMQPLV TGFDGHPWDW AAHQQGERTP RKNEVSRWNA GKDLSFVPLR
310 320 330 340 350
PERVVEVRYD YMEGVRFRHT AQFERWRPDR EPRTCTYEQL ERPVRFDLAE

VLTSR
Length:355
Mass (Da):40,758
Last modified:February 22, 2012 - v1
Checksum:i790C209A5119D098
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003170 Genomic DNA. Translation: AEV87951.1.
RefSeqiWP_014694015.1. NC_017803.1.
YP_006270019.1. NC_017803.1.

Genome annotation databases

EnsemblBacteriaiAEV87951; AEV87951; ACPL_7071.
GeneIDi12818838.
KEGGiase:ACPL_7071.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003170 Genomic DNA. Translation: AEV87951.1.
RefSeqiWP_014694015.1. NC_017803.1.
YP_006270019.1. NC_017803.1.

3D structure databases

ProteinModelPortaliG8SFG0.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEV87951; AEV87951; ACPL_7071.
GeneIDi12818838.
KEGGiase:ACPL_7071.

Phylogenomic databases

KOiK01971.
OMAiHERTADC.

Enzyme and pathway databases

BioCyciASP134676:GL7H-7055-MONOMER.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The complete genome sequence of the acarbose producer Actinoplanes sp. SE50/110."
    Schwientek P., Szczepanowski R., Kalinowski J., Klein A., Selber K., Wehmeier U.F., Stoye J., Puehler A.
    Submitted (DEC-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 31044 / CBS 674.73 / SE50/110Imported.

Entry informationi

Entry nameiG8SFG0_ACTS5
AccessioniPrimary (citable) accession number: G8SFG0
Entry historyi
Integrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: January 7, 2015
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.