Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

G8S1T4

- G8S1T4_ACTS5

UniProt

G8S1T4 - G8S1T4_ACTS5

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein

DNA ligase

Gene

ligB

Organism
Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).UniRule annotation

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA biosynthetic process Source: InterPro
  2. DNA ligation involved in DNA repair Source: InterPro
  3. DNA recombination Source: UniProtKB-KW
  4. DNA replication Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

LigaseUniRule annotationImported

Keywords - Biological processi

DNA damage, DNA recombinationUniRule annotation, DNA repairUniRule annotation, DNA replicationUniRule annotation

Keywords - Ligandi

ATP-bindingUniRule annotation, Nucleotide-binding

Enzyme and pathway databases

BioCyciASP134676:GL7H-1211-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
DNA ligaseUniRule annotation (EC:6.5.1.1UniRule annotation)
Gene namesi
Name:ligBImported
Ordered Locus Names:ACPL_1298Imported
OrganismiActinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110)Imported
Taxonomic identifieri134676 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicromonosporineaeMicromonosporaceaeActinoplanes
ProteomesiUP000005440: Chromosome

Family & Domainsi

Sequence similaritiesi

Belongs to the ATP-dependent DNA ligase family.UniRule annotation

Phylogenomic databases

KOiK01971.
OMAiARVQVHK.

Family and domain databases

Gene3Di1.10.3260.10. 1 hit.
2.40.50.140. 2 hits.
InterProiIPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR00574. dnl1. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

G8S1T4-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MGIVRFLDIA ATSAAVAATG GRKAKIELLA HALRRLEPDE IAAGSAYLAG
60 70 80 90 100
ELRQRQTGVG YAGLRERPAP ALEPTLTVAG VDASIAEIAT VAGAGSQARR
110 120 130 140 150
RQLLGALFGA ATADEQRLLT GLFSGELRQG AQAGLLTEAI AVAAAVPVTG
160 170 180 190 200
VRRALLLSGD LKQVAAAALT GGAAALAAIS LRVGTPLTPM LAQSAPDIAA
210 220 230 240 250
ALLATGTPAV VDTKLDGIRI QVHRSGDEVA VFTRSLDDIT ERLPGVVAAA
260 270 280 290 300
RALPLREVVL DGEAMALDEQ GRPRPFQETS SRAATRAKTG GTDAAAVLVP
310 320 330 340 350
YFFDLLHLDG TDLLDEPGRV RWAALADALP AGLIVGRQTV ETQEQGAAAF
360 370 380 390 400
AAALAAGQEG VVVKAPDAPY DVGRRGSAWV KVKPRHTLDL VVLAVEWGHG
410 420 430 440 450
RRRGWLSNLH LGARDPETGG FVMLGKTFKG LTDELLRWQT ERFKELAVDD
460 470 480 490 500
NGWVVRVRPE QVVEIAFDGV QTSPRYPGGV ALRFARVLRY RDDKPAAEAD
510
TIDAVRAIGG GAVTS
Length:515
Mass (Da):53,884
Last modified:February 22, 2012 - v1
Checksum:iF2F2CBA77E39B03E
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003170 Genomic DNA. Translation: AEV82195.1.
RefSeqiWP_014688268.1. NC_017803.1.
YP_006264263.1. NC_017803.1.

Genome annotation databases

EnsemblBacteriaiAEV82195; AEV82195; ACPL_1298.
GeneIDi12822120.
KEGGiase:ACPL_1298.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003170 Genomic DNA. Translation: AEV82195.1 .
RefSeqi WP_014688268.1. NC_017803.1.
YP_006264263.1. NC_017803.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEV82195 ; AEV82195 ; ACPL_1298 .
GeneIDi 12822120.
KEGGi ase:ACPL_1298.

Phylogenomic databases

KOi K01971.
OMAi ARVQVHK.

Enzyme and pathway databases

BioCyci ASP134676:GL7H-1211-MONOMER.

Family and domain databases

Gene3Di 1.10.3260.10. 1 hit.
2.40.50.140. 2 hits.
InterProi IPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR00574. dnl1. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "The complete genome sequence of the acarbose producer Actinoplanes sp. SE50/110."
    Schwientek P., Szczepanowski R., Kalinowski J., Klein A., Selber K., Wehmeier U.F., Stoye J., Puehler A.
    Submitted (DEC-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 31044 / CBS 674.73 / SE50/110Imported.

Entry informationi

Entry nameiG8S1T4_ACTS5
AccessioniPrimary (citable) accession number: G8S1T4
Entry historyi
Integrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: October 29, 2014
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3