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G8S1T4

- G8S1T4_ACTS5

UniProt

G8S1T4 - G8S1T4_ACTS5

Protein

DNA ligase

Gene

ligB

Organism
Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 14 (01 Oct 2014)
      Sequence version 1 (22 Feb 2012)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).

    GO - Molecular functioni

    1. ATP binding Source: UniProtKB-KW
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: UniProtKB-KW
    3. DNA replication Source: UniProtKB-KW

    Keywords - Molecular functioni

    LigaseUniRule annotationImported

    Keywords - Biological processi

    DNA damage, DNA recombinationUniRule annotation, DNA repairUniRule annotation, DNA replicationUniRule annotation

    Keywords - Ligandi

    ATP-bindingUniRule annotation, Nucleotide-binding

    Enzyme and pathway databases

    BioCyciASP134676:GL7H-1211-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    DNA ligaseUniRule annotation (EC:6.5.1.1UniRule annotation)
    Gene namesi
    Name:ligBImported
    Ordered Locus Names:ACPL_1298Imported
    OrganismiActinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110)Imported
    Taxonomic identifieri134676 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicromonosporineaeMicromonosporaceaeActinoplanes
    ProteomesiUP000005440: Chromosome

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ATP-dependent DNA ligase family.UniRule annotation

    Phylogenomic databases

    KOiK01971.
    OMAiARVQVHK.

    Family and domain databases

    Gene3Di1.10.3260.10. 1 hit.
    2.40.50.140. 2 hits.
    InterProiIPR000977. DNA_ligase_ATP-dep.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR00574. dnl1. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    G8S1T4-1 [UniParc]FASTAAdd to Basket

    « Hide

    MGIVRFLDIA ATSAAVAATG GRKAKIELLA HALRRLEPDE IAAGSAYLAG    50
    ELRQRQTGVG YAGLRERPAP ALEPTLTVAG VDASIAEIAT VAGAGSQARR 100
    RQLLGALFGA ATADEQRLLT GLFSGELRQG AQAGLLTEAI AVAAAVPVTG 150
    VRRALLLSGD LKQVAAAALT GGAAALAAIS LRVGTPLTPM LAQSAPDIAA 200
    ALLATGTPAV VDTKLDGIRI QVHRSGDEVA VFTRSLDDIT ERLPGVVAAA 250
    RALPLREVVL DGEAMALDEQ GRPRPFQETS SRAATRAKTG GTDAAAVLVP 300
    YFFDLLHLDG TDLLDEPGRV RWAALADALP AGLIVGRQTV ETQEQGAAAF 350
    AAALAAGQEG VVVKAPDAPY DVGRRGSAWV KVKPRHTLDL VVLAVEWGHG 400
    RRRGWLSNLH LGARDPETGG FVMLGKTFKG LTDELLRWQT ERFKELAVDD 450
    NGWVVRVRPE QVVEIAFDGV QTSPRYPGGV ALRFARVLRY RDDKPAAEAD 500
    TIDAVRAIGG GAVTS 515
    Length:515
    Mass (Da):53,884
    Last modified:February 22, 2012 - v1
    Checksum:iF2F2CBA77E39B03E
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003170 Genomic DNA. Translation: AEV82195.1.
    RefSeqiWP_014688268.1. NC_017803.1.
    YP_006264263.1. NC_017803.1.

    Genome annotation databases

    EnsemblBacteriaiAEV82195; AEV82195; ACPL_1298.
    GeneIDi12822120.
    KEGGiase:ACPL_1298.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003170 Genomic DNA. Translation: AEV82195.1 .
    RefSeqi WP_014688268.1. NC_017803.1.
    YP_006264263.1. NC_017803.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEV82195 ; AEV82195 ; ACPL_1298 .
    GeneIDi 12822120.
    KEGGi ase:ACPL_1298.

    Phylogenomic databases

    KOi K01971.
    OMAi ARVQVHK.

    Enzyme and pathway databases

    BioCyci ASP134676:GL7H-1211-MONOMER.

    Family and domain databases

    Gene3Di 1.10.3260.10. 1 hit.
    2.40.50.140. 2 hits.
    InterProi IPR000977. DNA_ligase_ATP-dep.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR00574. dnl1. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The complete genome sequence of the acarbose producer Actinoplanes sp. SE50/110."
      Schwientek P., Szczepanowski R., Kalinowski J., Klein A., Selber K., Wehmeier U.F., Stoye J., Puehler A.
      Submitted (DEC-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 31044 / CBS 674.73 / SE50/110Imported.

    Entry informationi

    Entry nameiG8S1T4_ACTS5
    AccessioniPrimary (citable) accession number: G8S1T4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 22, 2012
    Last sequence update: February 22, 2012
    Last modified: October 1, 2014
    This is version 14 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3