G8S1I6 (G8S1I6_ACTS5) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
RNA polymerase sigma factor RuleBase RU000716

Gene names

Ordered Locus Names:

ACPL_7568 EMBL AEV88448.1

Organism

Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) [Complete proteome] [HAMAP]

Taxonomic identifier

134676 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micromonosporineae › Micromonosporaceae › Actinoplanes

Protein attributes

Sequence length	272 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the sigma-70 factor family. ECF subfamily. RuleBase RU000716

Ontologies

Keywords
Biological process	Transcription Transcription regulation
Ligand	DNA-binding RuleBase RU000716 SAAS SAAS013325
Molecular function	Sigma factor RuleBase RU000716 SAAS SAAS013325
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA-dependent transcription, initiation Inferred from electronic annotation. Source: InterPro
Molecular_function	DNA binding Inferred from electronic annotation. Source: UniProtKB-KW sequence-specific DNA binding transcription factor activity Inferred from electronic annotation. Source: InterPro sigma factor activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	G8S1I6 [UniParc]. Last modified February 22, 2012. Version 1. Checksum: 22310F7EB811C6FB	FASTA	272	30,500
	10 20 30 40 50 60 MAEGVSVVRT GTERGMRERR EATRVRELLD APEWPATEPA PAAAPVSVST PVFESVTGAL 70 80 90 100 110 120 PVSSAGRSRG ESRVAQKERV DERRERFERD ALPFVDQLYA AGLRMTRNPA DAEDLVQETF 130 140 150 160 170 180 LKAFSAFHQF EEGTNLKAWL YRILTNTYIN SYRRKQRQPL QSPTEEITDW QLASSESHTS 190 200 210 220 230 240 TGLRSAETEA LDRLPDSDIK EALQSLPEDF RLAVYLADVE GFSYKEIADI MGTPIGTVMS 250 260 270 RLHRGRRNLR QLLVGYAADR GITRAASEPQ EA

References

[1]

"The complete genome sequence of the acarbose producer Actinoplanes sp. SE50/110." Schwientek P., Szczepanowski R., Kalinowski J., Klein A., Selber K., Wehmeier U.F., Stoye J., Puehler A. Submitted (DEC-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 31044 / CBS 674.73 / SE50/110.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP003170 Genomic DNA. Translation: AEV88448.1.
RefSeq	YP_006270516.1. NC_017803.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AEV88448; AEV88448; ACPL_7568.
GeneID	12825127.
KEGG	ase:ACPL_7568.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K03088.
Enzyme and pathway databases
BioCyc	ASP134676:GL7H-7556-MONOMER.
Family and domain databases
Gene3D	1.10.10.10. 1 hit.
InterPro	IPR014284. RNA_pol_sigma-70_dom. IPR014293. RNA_pol_sigma70_actinobac. IPR000838. RNA_pol_sigma70_ECF_CS. IPR007627. RNA_pol_sigma70_r2. IPR013249. RNA_pol_sigma70_r4_t2. IPR013325. RNA_pol_sigma_r2. IPR013324. RNA_pol_sigma_r3_r4. IPR011991. WHTH_DNA-bd_dom. [Graphical view]
Pfam	PF04542. Sigma70_r2. 1 hit. PF08281. Sigma70_r4_2. 1 hit. [Graphical view]
SUPFAM	SSF88946. Sigma_r2. 1 hit. SSF88659. Sigma_r3_r4. 1 hit.
TIGRFAMs	TIGR02947. SigH_actino. 1 hit. TIGR02937. sigma70-ECF. 1 hit.
PROSITE	PS01063. SIGMA70_ECF. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

G8S1I6_ACTS5

Accession

Primary (citable) accession number: G8S1I6

Entry history

Integrated into UniProtKB/TrEMBL:	February 22, 2012
Last sequence update:	February 22, 2012
Last modified:	May 29, 2013
This is version 10 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)