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G8RZ48 (G8RZ48_ACTS5) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 7. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
DNA ligase (ATP) EMBL AEV82051.1
EC=6.5.1.1 EMBL AEV82051.1
Gene names
Name:ligD EMBL AEV82051.1
Ordered Locus Names:ACPL_1154 EMBL AEV82051.1
OrganismActinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) [Complete proteome] [HAMAP]
Taxonomic identifier134676 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micromonosporineae › Micromonosporaceae › Actinoplanes

Protein attributes

Sequence length348 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL AEV82051.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
G8RZ48 [UniParc].

Last modified February 22, 2012. Version 1.
Checksum: 5EC12FD1BADA077E

FASTA34839,040
        10         20         30         40         50         60 
MPDRLDEYRR KRDPARTPEP VPQSPPAPRE PGRRFVIQQH HARSLHWDVR LERDGVLVSF 

        70         80         90        100        110        120 
AVPRGLPRDQ ARNHLAKHTE DHPLEYLDFA GEIPAGEYGG GRMTIFDAGT YETGKWRSDE 

       130        140        150        160        170        180 
ISVTFHGDRT KGRYVFFQTD GADWMVRRMD PPEPGWEPMP ADLSPMLATR AGTLPPDDAD 

       190        200        210        220        230        240 
WGYELAWGGQ RVLTYLSGGR VRLSGPGGKE LISLFPEVRA LGPALAPVEA IFDGELVAFD 

       250        260        270        280        290        300 
GTRPAADQTA RTARTRNPRP VQLLLYDLLW LDGHRTTELL RYAERRELLD DLAPAGPHWQ 

       310        320        330        340 
TPPYFPGGGR FALDAARSQG LSGVVAKRLD SPYLPGRTTR LWLDIEVS

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References

[1]"The complete genome sequence of the acarbose producer Actinoplanes sp. SE50/110."
Schwientek P., Szczepanowski R., Kalinowski J., Klein A., Selber K., Wehmeier U.F., Stoye J., Puehler A.
Submitted (DEC-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 31044 / CBS 674.73 / SE50/110.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP003170 Genomic DNA. Translation: AEV82051.1.
RefSeqYP_006264119.1. NC_017803.1.

3D structure databases

ProteinModelPortalG8RZ48.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEV82051; AEV82051; ACPL_1154.
GeneID12821971.
KEGGase:ACPL_1154.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.

Family and domain databases

InterProIPR012310. DNA_ligase_ATP-dep_cent.
IPR014144. LigD_PE_domain.
[Graphical view]
PfamPF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
TIGRFAMsTIGR02777. LigD_PE_dom. 1 hit.
ProtoNetSearch...

Entry information

Entry nameG8RZ48_ACTS5
AccessionPrimary (citable) accession number: G8RZ48
Entry history
Integrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: April 3, 2013
This is version 7 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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