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G8RQL9 (G8RQL9_MYCRN) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 10. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
HD-GYP domain-containing protein EMBL AEV71425.1
Gene names
Ordered Locus Names:MycrhN_0794 EMBL AEV71425.1
OrganismMycobacterium rhodesiae (strain NBB3) [Complete proteome] [HAMAP]
Taxonomic identifier710685 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Mycobacteriaceae › Mycobacterium ›

Protein attributes

Sequence length546 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Sequence similarities

Contains 1 HTH luxR-type DNA-binding domain. RuleBase RU000707

Sequences

Sequence LengthMass (Da)Tools
G8RQL9 [UniParc].

Last modified February 22, 2012. Version 1.
Checksum: 815AF2F5E8965608

FASTA54658,720
        10         20         30         40         50         60 
MSPVTATATV LTYPADPTVT TAQNRQMSTR AAPPELPTRA EVLAALSVAI DLGLGQPAEH 

        70         80         90        100        110        120 
MLRSALIATR IADRLSLTAS QRDCIYYATL IMWIGCHADS HEYARWFGDD IAVRRGSYLV 

       130        140        150        160        170        180 
DWSGLPYQRF LLTNIGRGES LLSRLRTVAT LYANARGHIS ELIHSHCTSA ALLAERIGLS 

       190        200        210        220        230        240 
SDVQTALRST FERFDGGGLP AGASGEAIPI EMRVAQLADM VEVHQREFGT EGAVAMARSR 

       250        260        270        280        290        300 
RGGQFDPAVV DAFLADPSGV LAVPSAGDVW ATALQHAPDR ATRLDGQSLD TLLVALGDFV 

       310        320        330        340        350        360 
DLKCPFTLGH SRAVATLAAD AALIAGLDDD AVTVTRRAAY VHDIGRIGVS NQIWSKSGGL 

       370        380        390        400        410        420 
TMAEFERMRL HPYLSERILS RVPGLKDVAS VATNHHECLD GSGYPRGLAA RQLTMPDRIL 

       430        440        450        460        470        480 
ACAVSYQSAL EPRPYREALG PAGAARRLRE RVRDGELDPV AADAVLYASG QAPDRPKTRP 

       490        500        510        520        530        540 
HGLTAREVEV LRLVAQGASN KEIAAQLVLS EKTVRNHVER TYTKIGVSNR IGASMYALEH 


GLTAEG

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References

[1]"Complete sequence of Mycobacterium rhodesiae NBB3."
US DOE Joint Genome Institute
Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Mikhailova N., Gu W., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Mattes T. expand/collapse author list , Holmes A., Rutledge P., Paulsen I., Coleman N., Woyke T.
Submitted (DEC-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NBB3 EMBL AEV71425.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP003169 Genomic DNA. Translation: AEV71425.1.
RefSeqYP_004998640.1. NC_016604.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEV71425; AEV71425; MycrhN_0794.
GeneID11641356.
KEGGmrh:MycrhN_0794.

Organism-specific databases

CMRSearch...

Family and domain databases

Gene3D1.10.10.10. 1 hit.
1.10.3210.10. 1 hit.
InterProIPR003607. HD/PDEase_dom.
IPR006674. HD_domain.
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR000792. Tscrpt_reg_LuxR_C.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamPF00196. GerE. 1 hit.
[Graphical view]
PRINTSPR00038. HTHLUXR.
SMARTSM00471. HDc. 1 hit.
SM00421. HTH_LUXR. 1 hit.
[Graphical view]
SUPFAMSSF46894. Bipartite_resp_reg_C-effector. 1 hit.
PROSITEPS00622. HTH_LUXR_1. 1 hit.
PS50043. HTH_LUXR_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameG8RQL9_MYCRN
AccessionPrimary (citable) accession number: G8RQL9
Entry history
Integrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: May 1, 2013
This is version 10 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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