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Protein
Submitted name:

HD-GYP domain-containing protein

Gene

MycrhN_0794

Organism
Mycobacterium rhodesiae (strain NBB3)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotation

Keywords - Ligandi

DNA-bindingUniRule annotationSAAS annotation

Enzyme and pathway databases

BioCyciMRHO710685:GI37-793-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
HD-GYP domain-containing proteinImported
Gene namesi
Ordered Locus Names:MycrhN_0794Imported
OrganismiMycobacterium rhodesiae (strain NBB3)Imported
Taxonomic identifieri710685 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesMycobacteriaceaeMycobacterium
ProteomesiUP000005442 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi710685.MycrhN_0794.

Structurei

3D structure databases

ProteinModelPortaliG8RQL9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Contains 1 HTH luxR-type DNA-binding domain.UniRule annotation

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
1.10.3210.10. 1 hit.
InterProiIPR003607. HD/PDEase_dom.
IPR006674. HD_domain.
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR000792. Tscrpt_reg_LuxR_C.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00196. GerE. 1 hit.
[Graphical view]
PRINTSiPR00038. HTHLUXR.
SMARTiSM00471. HDc. 1 hit.
SM00421. HTH_LUXR. 1 hit.
[Graphical view]
SUPFAMiSSF46894. SSF46894. 1 hit.
PROSITEiPS00622. HTH_LUXR_1. 1 hit.
PS50043. HTH_LUXR_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

G8RQL9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSPVTATATV LTYPADPTVT TAQNRQMSTR AAPPELPTRA EVLAALSVAI
60 70 80 90 100
DLGLGQPAEH MLRSALIATR IADRLSLTAS QRDCIYYATL IMWIGCHADS
110 120 130 140 150
HEYARWFGDD IAVRRGSYLV DWSGLPYQRF LLTNIGRGES LLSRLRTVAT
160 170 180 190 200
LYANARGHIS ELIHSHCTSA ALLAERIGLS SDVQTALRST FERFDGGGLP
210 220 230 240 250
AGASGEAIPI EMRVAQLADM VEVHQREFGT EGAVAMARSR RGGQFDPAVV
260 270 280 290 300
DAFLADPSGV LAVPSAGDVW ATALQHAPDR ATRLDGQSLD TLLVALGDFV
310 320 330 340 350
DLKCPFTLGH SRAVATLAAD AALIAGLDDD AVTVTRRAAY VHDIGRIGVS
360 370 380 390 400
NQIWSKSGGL TMAEFERMRL HPYLSERILS RVPGLKDVAS VATNHHECLD
410 420 430 440 450
GSGYPRGLAA RQLTMPDRIL ACAVSYQSAL EPRPYREALG PAGAARRLRE
460 470 480 490 500
RVRDGELDPV AADAVLYASG QAPDRPKTRP HGLTAREVEV LRLVAQGASN
510 520 530 540
KEIAAQLVLS EKTVRNHVER TYTKIGVSNR IGASMYALEH GLTAEG
Length:546
Mass (Da):58,720
Last modified:February 22, 2012 - v1
Checksum:i815AF2F5E8965608
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003169 Genomic DNA. Translation: AEV71425.1.
RefSeqiWP_014209240.1. NC_016604.1.
YP_004998640.1. NC_016604.1.

Genome annotation databases

EnsemblBacteriaiAEV71425; AEV71425; MycrhN_0794.
KEGGimrh:MycrhN_0794.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003169 Genomic DNA. Translation: AEV71425.1.
RefSeqiWP_014209240.1. NC_016604.1.
YP_004998640.1. NC_016604.1.

3D structure databases

ProteinModelPortaliG8RQL9.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi710685.MycrhN_0794.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEV71425; AEV71425; MycrhN_0794.
KEGGimrh:MycrhN_0794.

Enzyme and pathway databases

BioCyciMRHO710685:GI37-793-MONOMER.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
1.10.3210.10. 1 hit.
InterProiIPR003607. HD/PDEase_dom.
IPR006674. HD_domain.
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR000792. Tscrpt_reg_LuxR_C.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00196. GerE. 1 hit.
[Graphical view]
PRINTSiPR00038. HTHLUXR.
SMARTiSM00471. HDc. 1 hit.
SM00421. HTH_LUXR. 1 hit.
[Graphical view]
SUPFAMiSSF46894. SSF46894. 1 hit.
PROSITEiPS00622. HTH_LUXR_1. 1 hit.
PS50043. HTH_LUXR_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NBB3Imported.

Entry informationi

Entry nameiG8RQL9_MYCRN
AccessioniPrimary (citable) accession number: G8RQL9
Entry historyi
Integrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: June 24, 2015
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.