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Protein
Submitted name:

ATP-dependent DNA ligase

Gene

MycrhN_2032

Organism
Mycobacterium rhodesiae (strain NBB3)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciMRHO710685:GI37-2029-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:MycrhN_2032Imported
OrganismiMycobacterium rhodesiae (strain NBB3)Imported
Taxonomic identifieri710685 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCorynebacterialesMycobacteriaceaeMycobacterium
ProteomesiUP000005442 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi710685.MycrhN_2032.

Structurei

3D structure databases

ProteinModelPortaliG8RPS1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

G8RPS1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MELPVLPPVS PMLAKAVREI PPDASYEPKW DGFRSICFRD GDEVELGSRN
60 70 80 90 100
ERPLTRYFPE LVAAVRAELP NRCVIDGEIV IATDRGLDFE ALQQRIHPAD
110 120 130 140 150
SRVRMLAQKT PATFIVFDLL ALDDEDFTSR PFSERRAALV EALAGSGPSI
160 170 180 190 200
HVTPATTDLP TARRWFAEFE GAGLDGLIAK PLTVKYQPDK RVMFKIKPER
210 220 230 240 250
TADCVVAGYR VHKSSDEAIG SLLLGLYSGD GTLASVGVIG AFPMAKRREL
260 270 280 290 300
FTELQPLITT FDEHPWNWAA HMSGERTPRR NEGSRWNAGK DLSFVPLRPE
310 320 330 340 350
RVVEVRYDHM EGERFRHTAQ FNRWRPDRDP RSCTYDQLEQ PVTFSLGDIV

PGLGGGSGV
Length:359
Mass (Da):40,173
Last modified:February 22, 2012 - v1
Checksum:i37F24C6A8417595D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003169 Genomic DNA. Translation: AEV72634.1.
RefSeqiWP_014210447.1. NC_016604.1.
YP_004999849.1. NC_016604.1.

Genome annotation databases

EnsemblBacteriaiAEV72634; AEV72634; MycrhN_2032.
KEGGimrh:MycrhN_2032.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003169 Genomic DNA. Translation: AEV72634.1.
RefSeqiWP_014210447.1. NC_016604.1.
YP_004999849.1. NC_016604.1.

3D structure databases

ProteinModelPortaliG8RPS1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi710685.MycrhN_2032.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEV72634; AEV72634; MycrhN_2032.
KEGGimrh:MycrhN_2032.

Enzyme and pathway databases

BioCyciMRHO710685:GI37-2029-MONOMER.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NBB3Imported.

Entry informationi

Entry nameiG8RPS1_MYCRN
AccessioniPrimary (citable) accession number: G8RPS1
Entry historyi
Integrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: June 24, 2015
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.