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G8RPS1 (G8RPS1_MYCRN) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:MycrhN_2032 EMBL AEV72634.1
OrganismMycobacterium rhodesiae (strain NBB3) [Complete proteome] [HAMAP] EMBL AEV72634.1
Taxonomic identifier710685 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacterium

Protein attributes

Sequence length359 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL AEV72634.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
G8RPS1 [UniParc].

Last modified February 22, 2012. Version 1.
Checksum: 37F24C6A8417595D

FASTA35940,173
        10         20         30         40         50         60 
MELPVLPPVS PMLAKAVREI PPDASYEPKW DGFRSICFRD GDEVELGSRN ERPLTRYFPE 

        70         80         90        100        110        120 
LVAAVRAELP NRCVIDGEIV IATDRGLDFE ALQQRIHPAD SRVRMLAQKT PATFIVFDLL 

       130        140        150        160        170        180 
ALDDEDFTSR PFSERRAALV EALAGSGPSI HVTPATTDLP TARRWFAEFE GAGLDGLIAK 

       190        200        210        220        230        240 
PLTVKYQPDK RVMFKIKPER TADCVVAGYR VHKSSDEAIG SLLLGLYSGD GTLASVGVIG 

       250        260        270        280        290        300 
AFPMAKRREL FTELQPLITT FDEHPWNWAA HMSGERTPRR NEGSRWNAGK DLSFVPLRPE 

       310        320        330        340        350 
RVVEVRYDHM EGERFRHTAQ FNRWRPDRDP RSCTYDQLEQ PVTFSLGDIV PGLGGGSGV 

« Hide

References

[1]"Complete sequence of Mycobacterium rhodesiae NBB3."
US DOE Joint Genome Institute
Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Mikhailova N., Gu W., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Mattes T. expand/collapse author list , Holmes A., Rutledge P., Paulsen I., Coleman N., Woyke T.
Submitted (DEC-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NBB3 EMBL AEV72634.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003169 Genomic DNA. Translation: AEV72634.1.
RefSeqYP_004999849.1. NC_016604.1.

3D structure databases

ProteinModelPortalG8RPS1.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEV72634; AEV72634; MycrhN_2032.
GeneID11644136.
KEGGmrh:MycrhN_2032.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.

Enzyme and pathway databases

BioCycMRHO710685:GI37-2029-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameG8RPS1_MYCRN
AccessionPrimary (citable) accession number: G8RPS1
Entry history
Integrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: April 16, 2014
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)