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G8RNW2

- G8RNW2_MYCRN

UniProt

G8RNW2 - G8RNW2_MYCRN

Protein
Submitted name:

DNA ligase D/DNA polymerase LigD

Gene

MycrhN_3288

Organism
Mycobacterium rhodesiae (strain NBB3)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 16 (01 Oct 2014)
      Sequence version 1 (22 Feb 2012)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro
    3. DNA primase activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciMRHO710685:GI37-3281-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA ligase D/DNA polymerase LigDImported
    Gene namesi
    Ordered Locus Names:MycrhN_3288Imported
    OrganismiMycobacterium rhodesiae (strain NBB3)Imported
    Taxonomic identifieri710685 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacterium
    ProteomesiUP000005442: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliG8RNW2.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR002755. DNA_primase_S.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF01896. DNA_primase_S. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    G8RNW2-1 [UniParc]FASTAAdd to Basket

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    MVVDQFGRVK LTNPDKVLYP ATELRPKAVT KQEVFDYYVR IAEVMVPHIA    50
    GRAVTRKRWP NGVDEPSFFE KQLASSAPDW LERGSIAHKS GTTTYPIINS 100
    AEGLAWIAQQ ASLEVHVPQW RFVSTWTRDE GAEQTPGPAT RVVFDLDPGE 150
    GVTFRQLCEV AHEVRELIAG MGLTTFPLTS GSKGLHLYVP LDEPISSRGA 200
    SVLAKRVAQQ LEQAMPKRVT ATMTKSLRAG KVFLDWSQNN GNKTTIAPYS 250
    LRGRDEPTVA APRTWDEIED PELRHLRFDE VLERVERDGD LLAQMDTDAP 300
    VADALTTYRS MRDAGKTPEP VPHVAPTPGN DDFFVIQEHH ARRLHYDFRL 350
    ERNGVLVSWA VPKNLPDTPS VNHLAVHTED HPFEYGSFEG EIPKGEYGGG 400
    KVVIWDTGTY ETEKFRDHAP DGPAKGGEVI ITLHGKKIDG RYALIQTDGK 450
    NWLAHRMKEQ ANPQASDLAP MLSTEGSIAK LTSAQWAFEG KWDGYRVLVD 500
    ANHGKLNVRS RRGRDVTGEY PQFASLAADL ADHHVILDGE AVALDKHGVP 550
    SFSEMQNRAR STRVEFWAFD ILYLDGRSLL KAKYSDRRRL LEALADGGNL 600
    IVPDPLPGDG PEALEHAREH RWEGVVAKKL DATYQPGRRS KSWIKDKIWN 650
    TQEVVIGGWR KGDGGRSSGI GALMLGIPSP DNPEGGLQFV GRVGTGFTEK 700
    ELSKLKGILE PLATEESPFN ARLSTIDARG VTFVRPELVG EVRYSERTSD 750
    DRLRQPSWRG LRPDKEPSEI VWE 773
    Length:773
    Mass (Da):86,157
    Last modified:February 22, 2012 - v1
    Checksum:i859C6EC2AA3CFD17
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003169 Genomic DNA. Translation: AEV73813.1.
    RefSeqiWP_014211569.1. NC_016604.1.
    YP_005001028.1. NC_016604.1.

    Genome annotation databases

    EnsemblBacteriaiAEV73813; AEV73813; MycrhN_3288.
    GeneIDi11646028.
    KEGGimrh:MycrhN_3288.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003169 Genomic DNA. Translation: AEV73813.1 .
    RefSeqi WP_014211569.1. NC_016604.1.
    YP_005001028.1. NC_016604.1.

    3D structure databases

    ProteinModelPortali G8RNW2.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEV73813 ; AEV73813 ; MycrhN_3288 .
    GeneIDi 11646028.
    KEGGi mrh:MycrhN_3288.

    Phylogenomic databases

    KOi K01971.

    Enzyme and pathway databases

    BioCyci MRHO710685:GI37-3281-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR002755. DNA_primase_S.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF01896. DNA_primase_S. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: NBB3Imported.

    Entry informationi

    Entry nameiG8RNW2_MYCRN
    AccessioniPrimary (citable) accession number: G8RNW2
    Entry historyi
    Integrated into UniProtKB/TrEMBL: February 22, 2012
    Last sequence update: February 22, 2012
    Last modified: October 1, 2014
    This is version 16 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3