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G8RNW2

- G8RNW2_MYCRN

UniProt

G8RNW2 - G8RNW2_MYCRN

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Protein
Submitted name:

DNA ligase D/DNA polymerase LigD

Gene
MycrhN_3288
Organism
Mycobacterium rhodesiae (strain NBB3)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro
  3. DNA primase activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciMRHO710685:GI37-3281-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligase D/DNA polymerase LigDImported
Gene namesi
Ordered Locus Names:MycrhN_3288Imported
OrganismiMycobacterium rhodesiae (strain NBB3)Imported
Taxonomic identifieri710685 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacterium
ProteomesiUP000005442: Chromosome

Structurei

3D structure databases

ProteinModelPortaliG8RNW2.

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

G8RNW2-1 [UniParc]FASTAAdd to Basket

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MVVDQFGRVK LTNPDKVLYP ATELRPKAVT KQEVFDYYVR IAEVMVPHIA    50
GRAVTRKRWP NGVDEPSFFE KQLASSAPDW LERGSIAHKS GTTTYPIINS 100
AEGLAWIAQQ ASLEVHVPQW RFVSTWTRDE GAEQTPGPAT RVVFDLDPGE 150
GVTFRQLCEV AHEVRELIAG MGLTTFPLTS GSKGLHLYVP LDEPISSRGA 200
SVLAKRVAQQ LEQAMPKRVT ATMTKSLRAG KVFLDWSQNN GNKTTIAPYS 250
LRGRDEPTVA APRTWDEIED PELRHLRFDE VLERVERDGD LLAQMDTDAP 300
VADALTTYRS MRDAGKTPEP VPHVAPTPGN DDFFVIQEHH ARRLHYDFRL 350
ERNGVLVSWA VPKNLPDTPS VNHLAVHTED HPFEYGSFEG EIPKGEYGGG 400
KVVIWDTGTY ETEKFRDHAP DGPAKGGEVI ITLHGKKIDG RYALIQTDGK 450
NWLAHRMKEQ ANPQASDLAP MLSTEGSIAK LTSAQWAFEG KWDGYRVLVD 500
ANHGKLNVRS RRGRDVTGEY PQFASLAADL ADHHVILDGE AVALDKHGVP 550
SFSEMQNRAR STRVEFWAFD ILYLDGRSLL KAKYSDRRRL LEALADGGNL 600
IVPDPLPGDG PEALEHAREH RWEGVVAKKL DATYQPGRRS KSWIKDKIWN 650
TQEVVIGGWR KGDGGRSSGI GALMLGIPSP DNPEGGLQFV GRVGTGFTEK 700
ELSKLKGILE PLATEESPFN ARLSTIDARG VTFVRPELVG EVRYSERTSD 750
DRLRQPSWRG LRPDKEPSEI VWE 773
Length:773
Mass (Da):86,157
Last modified:February 22, 2012 - v1
Checksum:i859C6EC2AA3CFD17
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003169 Genomic DNA. Translation: AEV73813.1.
RefSeqiWP_014211569.1. NC_016604.1.
YP_005001028.1. NC_016604.1.

Genome annotation databases

EnsemblBacteriaiAEV73813; AEV73813; MycrhN_3288.
GeneIDi11646028.
KEGGimrh:MycrhN_3288.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003169 Genomic DNA. Translation: AEV73813.1 .
RefSeqi WP_014211569.1. NC_016604.1.
YP_005001028.1. NC_016604.1.

3D structure databases

ProteinModelPortali G8RNW2.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEV73813 ; AEV73813 ; MycrhN_3288 .
GeneIDi 11646028.
KEGGi mrh:MycrhN_3288.

Phylogenomic databases

KOi K01971.

Enzyme and pathway databases

BioCyci MRHO710685:GI37-3281-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: NBB3Imported.

Entry informationi

Entry nameiG8RNW2_MYCRN
AccessioniPrimary (citable) accession number: G8RNW2
Entry historyi
Integrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: September 3, 2014
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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