G8RN97 (G8RN97_MYCRN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Alanine racemase RuleBase RU000608
EC=5.1.1.1 RuleBase RU000608

Gene names

Ordered Locus Names:

MycrhN_0591 EMBL AEV71229.1

Organism

Mycobacterium rhodesiae (strain NBB3) [Complete proteome] [HAMAP]

Taxonomic identifier

710685 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Mycobacteriaceae › Mycobacterium › Mycobacterium rhodesiae

Protein attributes

Sequence length	389 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	L-alanine = D-alanine. SAAS SAAS020622 RuleBase RU000608
Cofactor	Pyridoxal phosphate By similarity. SAAS SAAS020622 RuleBase RU000608
Pathway	Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. SAAS SAAS020622 RuleBase RU004247
Sequence similarities	Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
Ligand	Pyridoxal phosphate SAAS SAAS020622 RuleBase RU000608
Molecular function	Isomerase SAAS SAAS020622 RuleBase RU000608
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	D-alanine biosynthetic process Inferred from electronic annotation. Source: UniProtKB-UniPathway
Molecular_function	alanine racemase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	G8RN97 [UniParc]. Last modified February 22, 2012. Version 1. Checksum: 0E304CA38F238B81	FASTA	389	41,558
	10 20 30 40 50 60 MTMQSTRATT PATAAPPSPE AVVDLDAVAH NVRLLRERAG LAQVMAVVKA DGYGHGATQT 70 80 90 100 110 120 GRAALAAGAA ELGVATVDEA IRLRRDGITA PVLAWLHPPG TDFAPALEAD VQIAVSSVRQ 130 140 150 160 170 180 IGELRDAAER TGRTAKVTVK VDTGLNRNGA SRAEYTAMLP ELKRALAEEA FTLRGLMSHL 190 200 210 220 230 240 VHGDLPDDPL NDLQAQRLRE MHGQARDQGL RYEVVHLSNS PSLLTRPDLG FDMVRPGIAV 250 260 270 280 290 300 YGQTPIPERG DMGLKPAMTL KCPVALVRPV QAGEGVSYGH TWISDRDTTL ALLPIGYADG 310 320 330 340 350 360 VFRNLSGRID VLINGRLRPA VGRVCMDQLV VDVGSDGDVR EGDDAILFGP GTDGEPTAQD 370 380 WAELLGTITY EVVTSPRGRV VRTYRGTPH

References

[1]

"Complete sequence of Mycobacterium rhodesiae NBB3." US DOE Joint Genome Institute Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Mikhailova N., Gu W., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Mattes T. , Holmes A., Rutledge P., Paulsen I., Coleman N., Woyke T. Submitted (DEC-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: NBB3 EMBL AEV71229.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP003169 Genomic DNA. Translation: AEV71229.1.
RefSeq	YP_004998444.1. NC_016604.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AEV71229; AEV71229; MycrhN_0591.
GeneID	11641153.
KEGG	mrh:MycrhN_0591.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K01775.
Enzyme and pathway databases
UniPathway	UPA00042; UER00497.
Family and domain databases
Gene3D	2.40.37.10. 1 hit.
HAMAP	MF_01201. Ala_racemase.
InterPro	IPR000821. Ala_racemase. IPR009006. Ala_racemase/Decarboxylase_C. IPR011079. Ala_racemase_C. IPR001608. Ala_racemase_N. IPR020622. Ala_racemase_pyridoxalP-BS. [Graphical view]
Pfam	PF00842. Ala_racemase_C. 1 hit. PF01168. Ala_racemase_N. 1 hit. [Graphical view]
PRINTS	PR00992. ALARACEMASE.
SMART	SM01005. Ala_racemase_C. 1 hit. [Graphical view]
SUPFAM	SSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMs	TIGR00492. alr. 1 hit.
PROSITE	PS00395. ALANINE_RACEMASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

G8RN97_MYCRN

Accession

Primary (citable) accession number: G8RN97

Entry history

Integrated into UniProtKB/TrEMBL:	February 22, 2012
Last sequence update:	February 22, 2012
Last modified:	April 3, 2013
This is version 13 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)