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G8RN97 (G8RN97_MYCRN) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 18. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length389 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids By similarity. HAMAP-Rule MF_01201

Catalytic activity

L-alanine = D-alanine. RuleBase RU004247 HAMAP-Rule MF_01201 SAAS SAAS009006

Cofactor

Pyridoxal phosphate By similarity. HAMAP-Rule MF_01201 SAAS SAAS009006

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. RuleBase RU004247 HAMAP-Rule MF_01201

Sequence similarities

Belongs to the alanine racemase family. RuleBase RU004188 HAMAP-Rule MF_01201

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site491Proton acceptor; specific for D-alanine By similarity HAMAP-Rule MF_01201
Active site2781Proton acceptor; specific for L-alanine By similarity HAMAP-Rule MF_01201
Binding site1471Substrate By similarity HAMAP-Rule MF_01201
Binding site3261Substrate; via amide nitrogen By similarity HAMAP-Rule MF_01201

Amino acid modifications

Modified residue491N6-(pyridoxal phosphate)lysine By similarity HAMAP-Rule MF_01201

Sequences

Sequence LengthMass (Da)Tools
G8RN97 [UniParc].

Last modified February 22, 2012. Version 1.
Checksum: 0E304CA38F238B81

FASTA38941,558
        10         20         30         40         50         60 
MTMQSTRATT PATAAPPSPE AVVDLDAVAH NVRLLRERAG LAQVMAVVKA DGYGHGATQT 

        70         80         90        100        110        120 
GRAALAAGAA ELGVATVDEA IRLRRDGITA PVLAWLHPPG TDFAPALEAD VQIAVSSVRQ 

       130        140        150        160        170        180 
IGELRDAAER TGRTAKVTVK VDTGLNRNGA SRAEYTAMLP ELKRALAEEA FTLRGLMSHL 

       190        200        210        220        230        240 
VHGDLPDDPL NDLQAQRLRE MHGQARDQGL RYEVVHLSNS PSLLTRPDLG FDMVRPGIAV 

       250        260        270        280        290        300 
YGQTPIPERG DMGLKPAMTL KCPVALVRPV QAGEGVSYGH TWISDRDTTL ALLPIGYADG 

       310        320        330        340        350        360 
VFRNLSGRID VLINGRLRPA VGRVCMDQLV VDVGSDGDVR EGDDAILFGP GTDGEPTAQD 

       370        380 
WAELLGTITY EVVTSPRGRV VRTYRGTPH 

« Hide

References

[1]"Complete sequence of Mycobacterium rhodesiae NBB3."
US DOE Joint Genome Institute
Lucas S., Han J., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Mikhailova N., Gu W., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Pagani I., Mattes T. expand/collapse author list , Holmes A., Rutledge P., Paulsen I., Coleman N., Woyke T.
Submitted (DEC-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NBB3 EMBL AEV71229.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003169 Genomic DNA. Translation: AEV71229.1.
RefSeqYP_004998444.1. NC_016604.1.

3D structure databases

ProteinModelPortalG8RN97.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEV71229; AEV71229; MycrhN_0591.
GeneID11641153.
KEGGmrh:MycrhN_0591.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01775.

Enzyme and pathway databases

BioCycMRHO710685:GI37-590-MONOMER.
UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. SSF50621. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameG8RN97_MYCRN
AccessionPrimary (citable) accession number: G8RN97
Entry history
Integrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: February 19, 2014
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)