G8R2E3 (G8R2E3_OWEHD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alanine racemase EMBL AEV32933.1

Gene names

Ordered Locus Names:

Oweho_1954 EMBL AEV32933.1

Organism

Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) [Complete proteome] [HAMAP] EMBL AEV32933.1

Taxonomic identifier

926562 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Bacteroidetes/Chlorobi group › Bacteroidetes › Flavobacteriia › Flavobacteriales › Cryomorphaceae › Owenweeksia › Owenweeksia hongkongensis

Protein attributes

Sequence length	822 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. SAAS SAAS000821

Ontologies

Keywords
Ligand	Pyridoxal phosphate SAAS SAAS000821
Molecular function	Isomerase SAAS SAAS000821
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	alanine metabolic process Inferred from electronic annotation. Source: InterPro biosynthetic process Inferred from electronic annotation. Source: InterPro cell division Inferred from electronic annotation. Source: InterPro regulation of cell shape Inferred from electronic annotation. Source: InterPro
Cellular_component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity Inferred from electronic annotation. Source: InterPro alanine racemase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	G8R2E3 [UniParc]. Last modified February 22, 2012. Version 1. Checksum: 3EFF30795E369B47	FASTA	822	91,953
	10 20 30 40 50 60 MAQLAISKIA ELLNAEFSAL YPSEIVTRIL LDSRQFSSAE GVLFFALRGK NHDGHKYIED 70 80 90 100 110 120 LVKKGVSHFV VEQMPTQTFD ANFVVVPDSL KALQDLAKHI REQSSAAVIA VTGSNGKTVV 130 140 150 160 170 180 KEWMGQILQK QFSTCRSPKS YNSQIGVPLS VWELEAKNEF AVFESGISEP DEMEKLEKIL 190 200 210 220 230 240 QPEIGIFTNI GSAHDANFES NSEKIAEKLK LFKHSKQLVY EANGSNLAKQ IEVFTEERGI 250 260 270 280 290 300 QLLSWTRENG PADLRIEVKI EEAQTVLIGT MDERTHTLQI PFTDAASIQN AIHCWRLGLE 310 320 330 340 350 360 LSLDEEEMKK SFAKLNPVEM RLQMKAGSNG NIIINDAYNS DMESLRVALH YLENQAGNRK 370 380 390 400 410 420 KVLIISELQQ SGLASEELFS RMAEVINRFE LDEIIAIGKD LKNGAFALNS TAIFYPSTKH 430 440 450 460 470 480 FLKNIYSHSF KQSAILLKGA RSFHFEEISS ALEEKSHQTV LNIYMNRMVY NLNYFRSKLN 490 500 510 520 530 540 GGTRIMAMVK AFSYGSGTYE IANLLQFHKV DYLGVAYTDE GVALRKAGIS LPILVLNAEP 550 560 570 580 590 600 SSFHDLVEYN LEPEVYSFHQ LEMLENALKN YNLSEAFKVH LKVETGMHRL GFVEDQLKDL 610 620 630 640 650 660 AEKLKSHRHI KVASVFSHLA ASDDPEQRDF TLGQVAKLKQ MTDKLKSDLG YSFLRHISNS 670 680 690 700 710 720 SGISQYPEAH FDMVRLGVGL YGIGSNVEDK KHLNVVSDLM ASVSQVKQLK VGDSVGYGRT 730 740 750 760 770 780 FVAEKPTTIA VVSIGYADGF RRSLSNGVGE VVISGKRYQV VGRVCMDMVM VDVTGSDVAE 790 800 810 820 GDEVEVFGPT ISVYELAQKM DTIPYEVLTG ISSRVKRVYF ME

References

[1]

"The complete genome of Owenweeksia hongkongensis DSM 17368." US DOE Joint Genome Institute (JGI-PGF) Lucas S., Han J., Lapidus A., Bruce D., Goodwin L., Pitluck S., Peters L., Kyrpides N., Mavromatis K., Ivanova N., Mikhailova N., Held B., Detter J.C., Tapia R., Han C., Land M., Hauser L., Markowitz V. , Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Tindall B., Pomrenke H., Brambilla E.-M., Klenk H.-P., Eisen J.A. Submitted (NOV-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 17368 / JCM 12287 / NRRL B-23963.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP003156 Genomic DNA. Translation: AEV32933.1.
RefSeq	YP_004989578.1. NC_016599.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AEV32933; AEV32933; Oweho_1954.
GeneID	11631068.
KEGG	oho:Oweho_1954.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K01775.
Enzyme and pathway databases
BioCyc	OHON926562:GHWV-1953-MONOMER.
Family and domain databases
Gene3D	2.40.37.10. 1 hit. 3.40.1190.10. 1 hit. 3.90.190.20. 1 hit.
HAMAP	MF_01201. Ala_racemase.
InterPro	IPR000821. Ala_racemase. IPR009006. Ala_racemase/Decarboxylase_C. IPR011079. Ala_racemase_C. IPR001608. Ala_racemase_N. IPR004101. Mur_ligase_C. IPR013221. Mur_ligase_cen. IPR000713. Mur_ligase_N. IPR005863. UDP-N-AcMur-pentapeptide_synth. [Graphical view]
PANTHER	PTHR23135:SF3. PTHR23135:SF3. 1 hit.
Pfam	PF00842. Ala_racemase_C. 1 hit. PF01168. Ala_racemase_N. 1 hit. PF01225. Mur_ligase. 1 hit. PF02875. Mur_ligase_C. 1 hit. PF08245. Mur_ligase_M. 1 hit. [Graphical view]
PRINTS	PR00992. ALARACEMASE.
SMART	SM01005. Ala_racemase_C. 1 hit. [Graphical view]
SUPFAM	SSF53244. Mur_ligase_C. 1 hit. SSF53623. Mur_ligase_cen. 1 hit. SSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMs	TIGR00492. alr. 1 hit. TIGR01143. murF. 1 hit.
ProtoNet	Search...

Entry information

Entry name

G8R2E3_OWEHD

Accession

Primary (citable) accession number: G8R2E3

Entry history

Integrated into UniProtKB/TrEMBL:	February 22, 2012
Last sequence update:	February 22, 2012
Last modified:	May 29, 2013
This is version 10 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)