Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Xylose isomerase

Gene

SpiGrapes_3031

Organism
Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

D-xylopyranose = D-xylulose.UniRule annotationSAAS annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

IsomeraseUniRule annotationSAAS annotation

Keywords - Biological processi

Carbohydrate metabolism, Pentose shuntUniRule annotationSAAS annotation, Xylose metabolismUniRule annotationSAAS annotation

Keywords - Ligandi

Metal-bindingUniRule annotationSAAS annotation

Enzyme and pathway databases

BioCyciSPLE158190:GHFO-3032-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Xylose isomeraseUniRule annotationSAAS annotation (EC:5.3.1.5UniRule annotationSAAS annotation)
Gene namesi
Ordered Locus Names:SpiGrapes_3031Imported
OrganismiSphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes)Imported
Taxonomic identifieri158190 [NCBI]
Taxonomic lineageiBacteriaSpirochaetesSpirochaetalesSpirochaetaceaeSphaerochaeta
ProteomesiUP000005632 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Interactioni

Subunit structurei

Homotetramer.UniRule annotation

Protein-protein interaction databases

STRINGi158190.SpiGrapes_3031.

Structurei

3D structure databases

ProteinModelPortaliG8QYD2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the xylose isomerase family.UniRule annotation

Phylogenomic databases

KOiK01805.
OMAiFDTFPDA.

Family and domain databases

Gene3Di3.20.20.150. 1 hit.
InterProiIPR013022. Xyl_isomerase-like_TIM-brl.
IPR001998. Xylose_isomerase.
[Graphical view]
PfamiPF01261. AP_endonuc_2. 1 hit.
[Graphical view]
SUPFAMiSSF51658. SSF51658. 1 hit.
PROSITEiPS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

G8QYD2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAKHSIILGN VGNFTDRFMG VGYQRDYTLE EMFDRVKSVK GVTGVELVGN
60 70 80 90 100
WHINERNFKQ VKKNLERTEL SLVSIIPDHF GIPEYGKGAF TSKDPKIREK
110 120 130 140 150
AVSDTKVMID IAVELGGDLI SLWPGQDGYD YFFQGNYIDE RGWFEEGVRA
160 170 180 190 200
CCTYRPSCKI SIEYKPKEPR NFSYASNVTS TLLMVQQINL SNLGVTIDYG
210 220 230 240 250
HGSVAGENLA ESVAILKKYG NKLFHVHMND NYGSWDDDMI TGSIHTIPFI
260 270 280 290 300
EFFYWLKKTG YEGYISTDQY PYREDGRDAC NESVRWFDVF ESMVDRIDEQ
310 320
KITALYETGN ACDISAFLRD LMFGR
Length:325
Mass (Da):37,196
Last modified:February 22, 2012 - v1
Checksum:i3B0E93D805B7CA8D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003155 Genomic DNA. Translation: AEV30779.1.
RefSeqiWP_014271618.1. NC_016633.1.
YP_005063789.1. NC_016633.1.

Genome annotation databases

EnsemblBacteriaiAEV30779; AEV30779; SpiGrapes_3031.
KEGGisgp:SpiGrapes_3031.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003155 Genomic DNA. Translation: AEV30779.1.
RefSeqiWP_014271618.1. NC_016633.1.
YP_005063789.1. NC_016633.1.

3D structure databases

ProteinModelPortaliG8QYD2.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi158190.SpiGrapes_3031.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEV30779; AEV30779; SpiGrapes_3031.
KEGGisgp:SpiGrapes_3031.

Phylogenomic databases

KOiK01805.
OMAiFDTFPDA.

Enzyme and pathway databases

BioCyciSPLE158190:GHFO-3032-MONOMER.

Family and domain databases

Gene3Di3.20.20.150. 1 hit.
InterProiIPR013022. Xyl_isomerase-like_TIM-brl.
IPR001998. Xylose_isomerase.
[Graphical view]
PfamiPF01261. AP_endonuc_2. 1 hit.
[Graphical view]
SUPFAMiSSF51658. SSF51658. 1 hit.
PROSITEiPS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-1885 / DSM 22778 / GrapesImported.

Entry informationi

Entry nameiG8QYD2_SPHPG
AccessioniPrimary (citable) accession number: G8QYD2
Entry historyi
Integrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: June 24, 2015
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.