Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

ATP dependent DNA ligase-like protein

Gene

Dsui_2466

Organism
Dechlorosoma suillum (strain ATCC BAA-33 / DSM 13638 / PS) (Azospira oryzae)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciAORY640081:GHAS-2465-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligase-like proteinImported
Gene namesi
Ordered Locus Names:Dsui_2466Imported
OrganismiDechlorosoma suillum (strain ATCC BAA-33 / DSM 13638 / PS) (Azospira oryzae)Imported
Taxonomic identifieri640081 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaRhodocyclalesRhodocyclaceaeAzospira
Proteomesi
  • UP000005633 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1919Sequence analysisAdd
BLAST
Chaini20 – 281262Sequence analysisPRO_5003514971Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi640081.Dsui_2466.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini213 – 27866DNA_ligase_OB_2InterPro annotationAdd
BLAST

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiENOG4105E1T. Bacteria.
COG1793. LUCA.
KOiK10747.
OrthoDBiPOG091H05UG.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.

Sequencei

Sequence statusi: Complete.

G8QMJ2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIRRLLLLLL SLGWSPLWAQ SPTVPPPPLL LAETYTGQED VAAYWVSEKL
60 70 80 90 100
DGVRAVWDGQ VLRFRSGRPV AAPAWFVAAL PATPLDGELW AGRGHFERLS
110 120 130 140 150
ATVRRELPDD AEWRQVRYMV FELPGGEGAF SERLQRLQAL VAGARVPWLQ
160 170 180 190 200
TVEQFRLANR AQLLARLEEV RRGGGEGLML HRADAPYVTG RSEVLLKVKP
210 220 230 240 250
WLDAEARVVA HLPGKGRYAG MLGALRVEMP DGRRFSLGTG FSAAERRQPP
260 270 280
PVGALITYRY RELTATGLPR FASYWRVRQD F
Length:281
Mass (Da):31,533
Last modified:February 22, 2012 - v1
Checksum:iA15EFE2E81351110
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003153 Genomic DNA. Translation: AEV26824.1.
RefSeqiWP_014237518.1. NC_016616.1.

Genome annotation databases

EnsemblBacteriaiAEV26824; AEV26824; Dsui_2466.
KEGGidsu:Dsui_2466.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003153 Genomic DNA. Translation: AEV26824.1.
RefSeqiWP_014237518.1. NC_016616.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi640081.Dsui_2466.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEV26824; AEV26824; Dsui_2466.
KEGGidsu:Dsui_2466.

Phylogenomic databases

eggNOGiENOG4105E1T. Bacteria.
COG1793. LUCA.
KOiK10747.
OrthoDBiPOG091H05UG.

Enzyme and pathway databases

BioCyciAORY640081:GHAS-2465-MONOMER.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiG8QMJ2_DECSP
AccessioniPrimary (citable) accession number: G8QMJ2
Entry historyi
Integrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: September 7, 2016
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.