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Protein
Submitted name:

ATP dependent DNA ligase-like protein

Gene

Dsui_2466

Organism
Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma suillum)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciAORY640081:GHAS-2465-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligase-like proteinImported
Gene namesi
Ordered Locus Names:Dsui_2466Imported
OrganismiAzospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma suillum)Imported
Taxonomic identifieri640081 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaRhodocyclalesRhodocyclaceaeAzospira
ProteomesiUP000005633 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1919 PotentialImportedAdd
BLAST
Chaini20 – 281262 PotentialImportedPRO_5000819615Add
BLAST

Family & Domainsi

Keywords - Domaini

SignalImported

Phylogenomic databases

KOiK10747.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

G8QMJ2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIRRLLLLLL SLGWSPLWAQ SPTVPPPPLL LAETYTGQED VAAYWVSEKL
60 70 80 90 100
DGVRAVWDGQ VLRFRSGRPV AAPAWFVAAL PATPLDGELW AGRGHFERLS
110 120 130 140 150
ATVRRELPDD AEWRQVRYMV FELPGGEGAF SERLQRLQAL VAGARVPWLQ
160 170 180 190 200
TVEQFRLANR AQLLARLEEV RRGGGEGLML HRADAPYVTG RSEVLLKVKP
210 220 230 240 250
WLDAEARVVA HLPGKGRYAG MLGALRVEMP DGRRFSLGTG FSAAERRQPP
260 270 280
PVGALITYRY RELTATGLPR FASYWRVRQD F
Length:281
Mass (Da):31,533
Last modified:February 21, 2012 - v1
Checksum:iA15EFE2E81351110
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003153 Genomic DNA. Translation: AEV26824.1.
RefSeqiYP_005028665.1. NC_016616.1.

Genome annotation databases

EnsemblBacteriaiAEV26824; AEV26824; Dsui_2466.
GeneIDi11545376.
KEGGidsu:Dsui_2466.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003153 Genomic DNA. Translation: AEV26824.1.
RefSeqiYP_005028665.1. NC_016616.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEV26824; AEV26824; Dsui_2466.
GeneIDi11545376.
KEGGidsu:Dsui_2466.

Phylogenomic databases

KOiK10747.

Enzyme and pathway databases

BioCyciAORY640081:GHAS-2465-MONOMER.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequence of the anaerobic perchlorate-reducing bacterium Azospira suillum strain PS."
    Byrne-Bailey K.G., Coates J.D.
    J. Bacteriol. 194:2767-2768(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-33 / DSM 13638 / PSImported.

Entry informationi

Entry nameiG8QMJ2_AZOSU
AccessioniPrimary (citable) accession number: G8QMJ2
Entry historyi
Integrated into UniProtKB/TrEMBL: February 21, 2012
Last sequence update: February 21, 2012
Last modified: March 3, 2015
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.