Skip Header

Contribute Send feedback
Read comments (?) or add your own

G8QI58 (G8QI58_AZOSU) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 6. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Pseudouridine synthase RuleBase RU003886
EC=5.4.99.- RuleBase RU003886
Gene names
Ordered Locus Names:Dsui_3127 EMBL AEV27461.1
OrganismAzospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma suillum) [Complete proteome] [HAMAP] EMBL AEV27461.1
Taxonomic identifier640081 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Rhodocyclales › Rhodocyclaceae › Azospira ›

Protein attributes

Sequence length248 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the pseudouridine synthase rluA family. RuleBase RU004243

Ontologies

Keywords
   Molecular functionIsomerase RuleBase RU003886
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processpseudouridine synthesis

Inferred from electronic annotation. Source: InterPro

   Molecular_functionRNA binding

Inferred from electronic annotation. Source: InterPro

pseudouridine synthase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
G8QI58 [UniParc].

Last modified February 22, 2012. Version 1.
Checksum: 1DE95F2AC055F531

FASTA24828,099
        10         20         30         40         50         60 
MLPIIYRDEH LIAIHKPPGL LVHRSLVDRH ETRFAVQLLR DQIGQWVYPA HRLDRGTSGV 

        70         80         90        100        110        120 
LLFALSSDMA RELGRQFEAQ TVHKTYLAVV RGHPEEVGVI DHALSRQFDD GEWQGERMNR 

       130        140        150        160        170        180 
EPQAALTRYR RLATVELPLA VDRYPSSRYA LLELEPATGR QHQLRRHLKH IAHPIIGDAT 

       190        200        210        220        230        240 
YGKGKHNRFF AQHFACPRLL LACLRLEVRH PASDAPLLLE APLEGDFARL VAELGWAQAL 


PAGLAGQT

« Hide

References

[1]"Complete genome sequence of the anaerobic perchlorate-reducing bacterium Azospira suillum strain PS."
Byrne-Bailey K.G., Coates J.D.
J. Bacteriol. 194:2767-2768(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-33 / DSM 13638 / PS.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP003153 Genomic DNA. Translation: AEV27461.1.
RefSeqYP_005029302.1. NC_016616.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEV27461; AEV27461; Dsui_3127.
GeneID11546043.
KEGGdsu:Dsui_3127.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK06175.

Family and domain databases

InterProIPR020103. PsdUridine_synth_cat_dom.
IPR006224. PsdUridine_synth_RluC/D_CS.
IPR006145. PsdUridine_synth_RsuA/RluD.
[Graphical view]
PfamPF00849. PseudoU_synth_2. 1 hit.
[Graphical view]
SUPFAMSSF55120. PsdUridine_synth_cat_dom. 1 hit.
PROSITEPS01129. PSI_RLU. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameG8QI58_AZOSU
AccessionPrimary (citable) accession number: G8QI58
Entry history
Integrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: April 3, 2013
This is version 6 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info