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Protein

Superoxide dismutase

Gene

sodA

Organism
Borrelia garinii BgVir
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

GO - Molecular functioni

  1. metal ion binding Source: InterPro
  2. superoxide dismutase activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotation

Enzyme and pathway databases

BioCyciBGAR1081646:GL9J-150-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutaseUniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Name:sodAImported
ORF Names:KK9_0151Imported
OrganismiBorrelia garinii BgVirImported
Taxonomic identifieri1081646 [NCBI]
Taxonomic lineageiBacteriaSpirochaetesSpirochaetalesSpirochaetaceaeBorreliaBorrelia burgdorferi group
ProteomesiUP000006806: Chromosome linear

Family & Domainsi

Sequence similaritiesi

Belongs to the iron/manganese superoxide dismutase family.UniRule annotation

Phylogenomic databases

KOiK04564.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

G8QDA3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFKLPELGYN YDAVEPYIDA KTMEIHHSKH HNGFVMNLNS IFEKMGKSHL
60 70 80 90 100
KDVSSILKNI HDFPDEFQTP IRNNAGGYSN HTLYFRSLKP GNKSNLLEKF
110 120 130 140 150
ENDVNRAFGS LDVLRASLKD TAMKIFGSGW AWLVLCPDSG LKVISMPNQD
160 170 180 190 200
SPLMKSYKPI LGIDVWEHAY YLKYQNRRIE YVDAFLKALN WEEVSKIYNE

ANN
Length:203
Mass (Da):23,455
Last modified:February 22, 2012 - v1
Checksum:i2EBECB9F83979374
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003151 Genomic DNA. Translation: AEW68491.1.
RefSeqiYP_006202844.1. NC_017717.1.

Genome annotation databases

EnsemblBacteriaiAEW68491; AEW68491; KK9_0151.
GeneIDi12797105.
KEGGibgb:KK9_0151.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003151 Genomic DNA. Translation: AEW68491.1.
RefSeqiYP_006202844.1. NC_017717.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEW68491; AEW68491; KK9_0151.
GeneIDi12797105.
KEGGibgb:KK9_0151.

Phylogenomic databases

KOiK04564.

Enzyme and pathway databases

BioCyciBGAR1081646:GL9J-150-MONOMER.

Family and domain databases

InterProiIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERiPTHR11404. PTHR11404. 1 hit.
PfamiPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000349. SODismutase. 1 hit.
PRINTSiPR01703. MNSODISMTASE.
SUPFAMiSSF46609. SSF46609. 1 hit.
SSF54719. SSF54719. 1 hit.
PROSITEiPS00088. SOD_MN. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Whole-Genome Sequencing of Borrelia garinii BgVir, Isolated from Taiga Ticks (Ixodes persulcatus)."
    Brenner E.V., Kurilshikov A.M., Stronin O.V., Fomenko N.V.
    J. Bacteriol. 194:5713-5713(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BgVirImported.

Entry informationi

Entry nameiG8QDA3_BORGR
AccessioniPrimary (citable) accession number: G8QDA3
Entry historyi
Integrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: March 4, 2015
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.