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G8PQX4 (G8PQX4_PSEUV) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 21. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Alanine racemase HAMAP-Rule MF_01201

EC=5.1.1.1 HAMAP-Rule MF_01201
Gene names
Name:dadB EMBL AEV37220.1
Ordered Locus Names:PSE_2712 EMBL AEV37220.1
OrganismPseudovibrio sp. (strain FO-BEG1) [Complete proteome] [HAMAP] EMBL AEV37220.1
Taxonomic identifier911045 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaePseudovibrio

Protein attributes

Sequence length383 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids By similarity. HAMAP-Rule MF_01201

Catalytic activity

L-alanine = D-alanine. HAMAP-Rule MF_01201

Cofactor

Pyridoxal phosphate By similarity. HAMAP-Rule MF_01201 SAAS SAAS001608

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. HAMAP-Rule MF_01201

Sequence similarities

Belongs to the alanine racemase family. HAMAP-Rule MF_01201 RuleBase RU004188

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site511Proton acceptor; specific for D-alanine By similarity HAMAP-Rule MF_01201
Active site2711Proton acceptor; specific for L-alanine By similarity HAMAP-Rule MF_01201
Binding site1491Substrate By similarity HAMAP-Rule MF_01201
Binding site3251Substrate; via amide nitrogen By similarity HAMAP-Rule MF_01201

Amino acid modifications

Modified residue511N6-(pyridoxal phosphate)lysine By similarity HAMAP-Rule MF_01201

Sequences

Sequence LengthMass (Da)Tools
G8PQX4 [UniParc].

Last modified February 22, 2012. Version 1.
Checksum: 6F91441482FBBAE2

FASTA38341,680
        10         20         30         40         50         60 
MTHSAAPTSD RPAVSAGGAA KLTIDLTALR SNWCYLNGKV GDGCTCAVVL KANGYGTGAA 

        70         80         90        100        110        120 
EVGKTLYHAG ARVFFVALPE EGIELRKELP HAEIYVLNGL FRDREKFYYD FDLKPVLNSL 

       130        140        150        160        170        180 
EEVAEWSSFA QSLQEELPAA LHFDTGMHRL GMSIGDALQI GESAHLLKGI RIDLVMSHLA 

       190        200        210        220        230        240 
CADTPGHGLN EKQLNRFQRV CELFPEARKS LSNSAGIFLG DDYHFDMVRP GIALYGGNPV 

       250        260        270        280        290        300 
PDETNPMLPV AHVQAEIISL REVPHGDPVG YGASRVTPRK SRIATINAGY ADGLHRLVGS 

       310        320        330        340        350        360 
SDDQPNGARV YIGGHFAPIF GRVSMDMIAV DVTDIPEEHL SRGAPVEIMG AHVNVDELAE 

       370        380 
FAQTIPYELL CSLGARYTRH YKR 

« Hide

References

[1]"The genus Pseudovibrio contains metabolically versatile and symbiotically interacting bacteria."
Bondarev V., Richter M., Piel J., Schwedt A., Schulz-Vogt H.N.
Submitted (NOV-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: FO-BEG1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003147 Genomic DNA. Translation: AEV37220.1.
RefSeqYP_005081242.1. NC_016642.1.

3D structure databases

ProteinModelPortalG8PQX4.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEV37220; AEV37220; PSE_2712.
GeneID11590600.
KEGGpsf:PSE_2712.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01775.
OMAITIKSHV.

Enzyme and pathway databases

BioCycPSP911045:GJTQ-2740-MONOMER.
UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR029066. PLP-binding_barrel.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
ProtoNetSearch...

Entry information

Entry nameG8PQX4_PSEUV
AccessionPrimary (citable) accession number: G8PQX4
Entry history
Integrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: July 9, 2014
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)