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Protein

Glutamate decarboxylase

Gene

gadA

Organism
Pseudovibrio sp. (strain FO-BEG1)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

  1. glutamate decarboxylase activity Source: UniProtKB-EC
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. glutamate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

DecarboxylaseUniRule annotation, Lyase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciPSP911045:GJTQ-5109-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
Gene namesi
Name:gadAImported
Ordered Locus Names:PSE_5033Imported
OrganismiPseudovibrio sp. (strain FO-BEG1)Imported
Taxonomic identifieri911045 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaePseudovibrio
ProteomesiUP000005634: Chromosome

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

KOiK01580.
OMAiFVGTWMD.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

Sequencei

Sequence statusi: Complete.

G8PNP3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPLWKTCASE SPDIYATARA VEGLAKARIP ETGVSPEEAY NLVRDELYLD
60 70 80 90 100
GNARQNLATF CTTWVEDEVH KLMADCIDKN MIDKDEYPQT AEIEARCVHI
110 120 130 140 150
IASLWNSPEA EETIGCSTTG SSEAAMLGGL ALKWAWRDRR KKEGKPHDKP
160 170 180 190 200
NMVCGPVQVC WHKFAKYFDV ELRQIPLSEG SLHMRPEQLK DYVDENTICV
210 220 230 240 250
VPTLGVTFTG VYEPVKEICQ ELDRLQTETG LDIPVHVDAA SGGFVAPFLH
260 270 280 290 300
PELLWDFRLD RVKSINASGH KFGLAPLGVG WVIWRDKKEL PSDLVFNVDY
310 320 330 340 350
LGGNMPTFAL NFSRPGGQIV IQYYNFMRLG WDGYRDIQSA CAENAQYLAE
360 370 380 390 400
KLSELPELDI LYDGNGALPC VCYRLKHPDK AHYTLYDLSE RVRMNGWQIA
410 420 430 440 450
SYPLPSDMED TVVQRVMIRH GVSHDAVEQL YLDIKKALNY LDKNNIKWSE

AGPSFSHG
Length:458
Mass (Da):51,724
Last modified:February 22, 2012 - v1
Checksum:iB88FA91693D80021
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003147 Genomic DNA. Translation: AEV39535.1.
RefSeqiWP_014287232.1. NC_016642.1.
YP_005083557.1. NC_016642.1.

Genome annotation databases

EnsemblBacteriaiAEV39535; AEV39535; PSE_5033.
GeneIDi11593629.
KEGGipsf:PSE_5033.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003147 Genomic DNA. Translation: AEV39535.1.
RefSeqiWP_014287232.1. NC_016642.1.
YP_005083557.1. NC_016642.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEV39535; AEV39535; PSE_5033.
GeneIDi11593629.
KEGGipsf:PSE_5033.

Phylogenomic databases

KOiK01580.
OMAiFVGTWMD.

Enzyme and pathway databases

BioCyciPSP911045:GJTQ-5109-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "The genus Pseudovibrio contains metabolically versatile and symbiotically interacting bacteria."
    Bondarev V., Richter M., Piel J., Schwedt A., Schulz-Vogt H.N.
    Submitted (NOV-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: FO-BEG1Imported.

Entry informationi

Entry nameiG8PNP3_PSEUV
AccessioniPrimary (citable) accession number: G8PNP3
Entry historyi
Integrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: February 4, 2015
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.