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G8PMX1 (G8PMX1_PSEUV) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Malate dehydrogenase HAMAP-Rule MF_00487

EC=1.1.1.37 HAMAP-Rule MF_00487
Gene names
Name:mdh HAMAP-Rule MF_00487 EMBL AEV35126.1
Ordered Locus Names:PSE_0614 EMBL AEV35126.1
OrganismPseudovibrio sp. (strain FO-BEG1) [Complete proteome] [HAMAP] EMBL AEV35126.1
Taxonomic identifier911045 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhodobacteralesRhodobacteraceaePseudovibrio

Protein attributes

Sequence length320 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the reversible oxidation of malate to oxaloacetate By similarity. HAMAP-Rule MF_00487 SAAS SAAS011275

Catalytic activity

(S)-malate + NAD+ = oxaloacetate + NADH. HAMAP-Rule MF_00487

Sequence similarities

Belongs to the LDH/MDH superfamily. MDH type 3 family. HAMAP-Rule MF_00487

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding10 – 156NAD By similarity HAMAP-Rule MF_00487
Nucleotide binding119 – 1213NAD By similarity HAMAP-Rule MF_00487

Sites

Active site1761Proton acceptor By similarity HAMAP-Rule MF_00487
Binding site341NAD By similarity HAMAP-Rule MF_00487
Binding site831Substrate By similarity HAMAP-Rule MF_00487
Binding site891Substrate By similarity HAMAP-Rule MF_00487
Binding site961NAD By similarity HAMAP-Rule MF_00487
Binding site1211Substrate By similarity HAMAP-Rule MF_00487
Binding site1521Substrate By similarity HAMAP-Rule MF_00487

Sequences

Sequence LengthMass (Da)Tools
G8PMX1 [UniParc].

Last modified February 22, 2012. Version 1.
Checksum: CC3B2B5B88936B7A

FASTA32033,893
        10         20         30         40         50         60 
MARNKIALIG SGQIGGTLAH LAGLKELGDI VLFDIAEGMP QGKALDLAES SPVDGFDSGL 

        70         80         90        100        110        120 
SGTNTYEGIE GADVVIVTAG VPRKPGMSRD DLLEINLKVM EQVGAGIKKY APDAFVICIT 

       130        140        150        160        170        180 
NPLDAMVWAL QKFSGLPANK VVGMAGVLDS ARFRYFLAEE FNVSVEDVTA FVLGGHGDTM 

       190        200        210        220        230        240 
VPLTRYSTVA GVPLTDLVKM GWLTAERLEE IVQRTRDGGA EIVGLLKTGS AFYAPAASAI 

       250        260        270        280        290        300 
QMAESYLKDK KRVLPCAAHL DGQYGQKDMY VGVPTVIGAN GIERIIEIDL NSDEKAMFDK 

       310        320 
SVASVNGLVD ACKKIQPALA 

« Hide

References

[1]"The genus Pseudovibrio contains metabolically versatile and symbiotically interacting bacteria."
Bondarev V., Richter M., Piel J., Schwedt A., Schulz-Vogt H.N.
Submitted (NOV-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: FO-BEG1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003147 Genomic DNA. Translation: AEV35126.1.
RefSeqYP_005079148.1. NC_016642.1.

3D structure databases

ProteinModelPortalG8PMX1.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEV35126; AEV35126; PSE_0614.
GeneID11588888.
KEGGpsf:PSE_0614.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK00024.
OMADANIVEC.

Enzyme and pathway databases

BioCycPSP911045:GJTQ-618-MONOMER.

Family and domain databases

Gene3D3.40.50.720. 1 hit.
3.90.110.10. 1 hit.
HAMAPMF_00487. Malate_dehydrog_3.
InterProIPR001557. L-lactate/malate_DH.
IPR022383. Lactate/malate_DH_C.
IPR001236. Lactate/malate_DH_N.
IPR015955. Lactate_DH/Glyco_Ohase_4_C.
IPR011275. Malate_DH_type3.
IPR016040. NAD(P)-bd_dom.
[Graphical view]
PANTHERPTHR11540. PTHR11540. 1 hit.
PfamPF02866. Ldh_1_C. 1 hit.
PF00056. Ldh_1_N. 1 hit.
[Graphical view]
PIRSFPIRSF000102. Lac_mal_DH. 1 hit.
PRINTSPR00086. LLDHDRGNASE.
SUPFAMSSF56327. SSF56327. 1 hit.
TIGRFAMsTIGR01763. MalateDH_bact. 1 hit.
ProtoNetSearch...

Entry information

Entry nameG8PMX1_PSEUV
AccessionPrimary (citable) accession number: G8PMX1
Entry history
Integrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: June 11, 2014
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)