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G8NZZ5

- G8NZZ5_GRAMM

UniProt

G8NZZ5 - G8NZZ5_GRAMM

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Protein
Submitted name: DNA ligase D
Gene
AciX8_1368
Organism
Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro
  3. DNA primase activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciGMAL682795:GHBV-1385-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligase DImported
Gene namesi
Ordered Locus Names:AciX8_1368Imported
OrganismiGranulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8)Imported
Taxonomic identifieri682795 [NCBI]
Taxonomic lineageiBacteriaAcidobacteriaAcidobacterialesAcidobacteriaceaeGranulicella
ProteomesiUP000007113: Chromosome

Structurei

3D structure databases

ProteinModelPortaliG8NZZ5.

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

G8NZZ5-1 [UniParc]FASTAAdd to Basket

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MAPTKKAVSR KPASKKTAAK RTPHKTHASA ADAVDEQLAR YREMRDFKVT    50
AEPSGKGKST KAKASGLPFV IQKHAASHLH YDFRLGWNGV LKSWAVAKGP 100
SYFTGDRRLA VQVEDHPMEY GGFEGIIPKG QYGGGTVMVW DQGTWEPQPG 150
HEDVDAGLRE GSLKFVMHGT KMTGKWTLVR MGGKAANERK PNWLLIKEHD 200
EFERGKDDPS ITDEAPDSAV TGRTLDQIAG QEDHVWNSKD TARGKAWHRQ 250
KPAAPEKKAQ SPRSPKAKND AALKDLPRET QPAFLSPQLA LEATGPPGKE 300
GWLHELKLDG YRIQARKSGS DVQLLTRKGL DWTHRMPAIA KDITKLPAEN 350
ATLDGEVVVV SENGTTSFAN LQASFQDGEK HPLTYFCFDL LHLNGRNTRG 400
LSLRERKALL AEILGEGIGS VHLSEHIETG GESMFHQACE LHAEGIISKW 450
GASTYSSGRS GEWLKSKCLR EQEFVIGGYT LSSEGPDRIG SLLLGYYRDG 500
KLIYSGRTGT GFTQKTRRTL RKQLGDLENR SMPFARVPVD GRRDAIWVKP 550
KLVAQVRFAT WTADNLVRQA AFLGLREDKP AKEVQREEAT VAPQPKGTSK 600
RPAKTAPVVA THRAAVPIAA KTATKTATTG SIRLTHPDKI LDAESGLTKA 650
DLSAFYQGVA EHMLPHIADR PLSLVRCPEG TGKPCFFQKH VNHMLPPGVG 700
GIDVPNKKTG EPEPYITLNT TEALINLAQM GVLEVHPWGS RNDDLEHPDR 750
LIFDLDPDES LPWSTLCDAA AEVRKRLKKA GLESFLKTTG GKGLHVVAPI 800
QPELDWPQLK ALAHKFVESM ERENPTLYLT KMTKSARKGK IYLDYLRNER 850
GATAVAPYSP RARAGAHVSL PLPWSALKLP ERPVYSVKNF DEWRSRLRND 900
PWKAMLTTRQ KLDPASFEQA 920
Length:920
Mass (Da):101,738
Last modified:February 22, 2012 - v1
Checksum:iBE6D42A5BD7DA964
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003130 Genomic DNA. Translation: AEU35711.1.
RefSeqiYP_005056741.1. NC_016631.1.

Genome annotation databases

EnsemblBacteriaiAEU35711; AEU35711; AciX8_1368.
GeneIDi11571817.
KEGGigma:AciX8_1368.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003130 Genomic DNA. Translation: AEU35711.1 .
RefSeqi YP_005056741.1. NC_016631.1.

3D structure databases

ProteinModelPortali G8NZZ5.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEU35711 ; AEU35711 ; AciX8_1368 .
GeneIDi 11571817.
KEGGi gma:AciX8_1368.

Phylogenomic databases

KOi K01971.

Enzyme and pathway databases

BioCyci GMAL682795:GHBV-1385-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of Granulicella mallensis MP5ACTX8."
    US DOE Joint Genome Institute
    Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Lu M., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Mikhailova N., Pagani I., Rawat S.
    , Mannisto M., Haggblom M., Woyke T.
    Submitted (NOV-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-1857 / DSM 23137 / MP5ACTX8.

Entry informationi

Entry nameiG8NZZ5_GRAMM
AccessioniPrimary (citable) accession number: G8NZZ5
Entry historyi
Integrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: April 16, 2014
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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