Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

DNA ligase

Gene

AciX8_2056

Organism
Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + (deoxyribonucleotide)(n)-3'-hydroxyl + 5'-phospho-(deoxyribonucleotide)(m) = (deoxyribonucleotide)(n+m) + AMP + diphosphate.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLigaseUniRule annotationImported
Biological processDNA damage, DNA recombinationUniRule annotation, DNA repairUniRule annotation, DNA replicationUniRule annotation
LigandATP-bindingUniRule annotation, Nucleotide-binding

Enzyme and pathway databases

BioCyciGMAL682795:G1GPY-2058-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
DNA ligaseUniRule annotation (EC:6.5.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:AciX8_2056Imported
OrganismiGranulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8)Imported
Taxonomic identifieri682795 [NCBI]
Taxonomic lineageiBacteriaAcidobacteriaAcidobacterialesAcidobacteriaceaeGranulicella
Proteomesi
  • UP000007113 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi682795.AciX8_2056

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini395 – 555DNA_LIGASE_A3InterPro annotationAdd BLAST161

Sequence similaritiesi

Belongs to the ATP-dependent DNA ligase family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4107T0X Bacteria
COG1793 LUCA
KOiK10747
OMAiWIKYKRD
OrthoDBiPOG091H09SJ

Family and domain databases

Gene3Di1.10.3260.10, 1 hit
InterProiView protein in InterPro
IPR000977 DNA_ligase_ATP-dep
IPR012309 DNA_ligase_ATP-dep_C
IPR012310 DNA_ligase_ATP-dep_cent
IPR016059 DNA_ligase_ATP-dep_CS
IPR012308 DNA_ligase_ATP-dep_N
IPR036599 DNA_ligase_N_sf
IPR012340 NA-bd_OB-fold
PfamiView protein in Pfam
PF04679 DNA_ligase_A_C, 1 hit
PF01068 DNA_ligase_A_M, 1 hit
PF04675 DNA_ligase_A_N, 1 hit
SUPFAMiSSF117018 SSF117018, 1 hit
SSF50249 SSF50249, 1 hit
TIGRFAMsiTIGR00574 dnl1, 1 hit
PROSITEiView protein in PROSITE
PS00697 DNA_LIGASE_A1, 1 hit
PS50160 DNA_LIGASE_A3, 1 hit

Sequencei

Sequence statusi: Complete.

G8NTR2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAFFVALATL AEKLSQEGSR LKKRAAIAEA IASLHAAAPE SSDAGRFALY
60 70 80 90 100
LAGQPFAEND ARKLNAGGAL LSRAVLTVAG ADNAQLTAAY RRHGDLGAAA
110 120 130 140 150
HDLLVAPHGK APSTATLTLD DVADAFAAMA VARTTAARSS LVEGLLTRAT
160 170 180 190 200
AVEAKYLLKL MLGDMRIGVK QSLIEEAIAV ASGTEVAAVR HGVMLEADLV
210 220 230 240 250
CAVGRAFAGT LAAARMTLFH PLGFMLASPV ETPEAAVERF TEAPAKEKPA
260 270 280 290 300
KVAKPKKARK KRVGEDFVDL APVQEVVARD APEEGLAEDA QIEALASGEL
310 320 330 340 350
SAGSSGVLAF LEDKYDGMRA QVHCGDPSQP GRVAIYSRNR EDITQSFPEL
360 370 380 390 400
AEAFAQVEEP MILDGEILGW DFGKSQALPF AVMGQRIGRK VVSDEVRRQI
410 420 430 440 450
PAVFMAFDLL FVGDELLLPL PLTRRRMLLE EVVARWSEHA RSALAADSTR
460 470 480 490 500
KADQAGLFSE TAPVAEQKTR WMLSPSQPVT DAAAIDQAYR DARARANEGV
510 520 530 540 550
MLKRADSAYL PGRRGLAWVK LKRELATLDV VITGAEFGHG KRAGLLSDYT
560 570 580 590 600
FAVRGQAGQL LNVGKAYSGL TDAEILEMTA WLKAHTLEDR GYFRTVEPQI
610 620 630 640 650
VLEVAFNNIM RSSRHASGFA LRFPRILHIR RDKPVSEIDT LEQVEAVYQT
660
QPDRPDESLE E
Length:661
Mass (Da):71,326
Last modified:February 22, 2012 - v1
Checksum:i7AFAE79C7406B3C9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003130 Genomic DNA Translation: AEU36386.1
RefSeqiWP_014265264.1, NC_016631.1

Genome annotation databases

EnsemblBacteriaiAEU36386; AEU36386; AciX8_2056
KEGGigma:AciX8_2056

Similar proteinsi

Entry informationi

Entry nameiG8NTR2_GRAMM
AccessioniPrimary (citable) accession number: G8NTR2
Entry historyiIntegrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: March 28, 2018
This is version 32 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health