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G8NTR2

- G8NTR2_GRAMM

UniProt

G8NTR2 - G8NTR2_GRAMM

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Protein

DNA ligase

Gene
AciX8_2056
Organism
Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).UniRule annotation

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: UniProtKB-KW
  3. DNA replication Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

LigaseUniRule annotationImported

Keywords - Biological processi

DNA damage, DNA recombinationUniRule annotation, DNA repairUniRule annotation, DNA replicationUniRule annotation

Keywords - Ligandi

ATP-bindingUniRule annotation, Nucleotide-binding

Enzyme and pathway databases

BioCyciGMAL682795:GHBV-2083-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
DNA ligaseUniRule annotation (EC:6.5.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:AciX8_2056Imported
OrganismiGranulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8)Imported
Taxonomic identifieri682795 [NCBI]
Taxonomic lineageiBacteriaAcidobacteriaAcidobacterialesAcidobacteriaceaeGranulicella
ProteomesiUP000007113: Chromosome

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

KOiK10747.

Family and domain databases

Gene3Di1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProiIPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR00574. dnl1. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

G8NTR2-1 [UniParc]FASTAAdd to Basket

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MAFFVALATL AEKLSQEGSR LKKRAAIAEA IASLHAAAPE SSDAGRFALY    50
LAGQPFAEND ARKLNAGGAL LSRAVLTVAG ADNAQLTAAY RRHGDLGAAA 100
HDLLVAPHGK APSTATLTLD DVADAFAAMA VARTTAARSS LVEGLLTRAT 150
AVEAKYLLKL MLGDMRIGVK QSLIEEAIAV ASGTEVAAVR HGVMLEADLV 200
CAVGRAFAGT LAAARMTLFH PLGFMLASPV ETPEAAVERF TEAPAKEKPA 250
KVAKPKKARK KRVGEDFVDL APVQEVVARD APEEGLAEDA QIEALASGEL 300
SAGSSGVLAF LEDKYDGMRA QVHCGDPSQP GRVAIYSRNR EDITQSFPEL 350
AEAFAQVEEP MILDGEILGW DFGKSQALPF AVMGQRIGRK VVSDEVRRQI 400
PAVFMAFDLL FVGDELLLPL PLTRRRMLLE EVVARWSEHA RSALAADSTR 450
KADQAGLFSE TAPVAEQKTR WMLSPSQPVT DAAAIDQAYR DARARANEGV 500
MLKRADSAYL PGRRGLAWVK LKRELATLDV VITGAEFGHG KRAGLLSDYT 550
FAVRGQAGQL LNVGKAYSGL TDAEILEMTA WLKAHTLEDR GYFRTVEPQI 600
VLEVAFNNIM RSSRHASGFA LRFPRILHIR RDKPVSEIDT LEQVEAVYQT 650
QPDRPDESLE E 661
Length:661
Mass (Da):71,326
Last modified:February 22, 2012 - v1
Checksum:i7AFAE79C7406B3C9
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003130 Genomic DNA. Translation: AEU36386.1.
RefSeqiYP_005057416.1. NC_016631.1.

Genome annotation databases

EnsemblBacteriaiAEU36386; AEU36386; AciX8_2056.
GeneIDi11573163.
KEGGigma:AciX8_2056.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003130 Genomic DNA. Translation: AEU36386.1 .
RefSeqi YP_005057416.1. NC_016631.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEU36386 ; AEU36386 ; AciX8_2056 .
GeneIDi 11573163.
KEGGi gma:AciX8_2056.

Phylogenomic databases

KOi K10747.

Enzyme and pathway databases

BioCyci GMAL682795:GHBV-2083-MONOMER.

Family and domain databases

Gene3Di 1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProi IPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR00574. dnl1. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of Granulicella mallensis MP5ACTX8."
    US DOE Joint Genome Institute
    Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Lu M., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Mikhailova N., Pagani I., Rawat S.
    , Mannisto M., Haggblom M., Woyke T.
    Submitted (NOV-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC BAA-1857 / DSM 23137 / MP5ACTX8.

Entry informationi

Entry nameiG8NTR2_GRAMM
AccessioniPrimary (citable) accession number: G8NTR2
Entry historyi
Integrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: October 16, 2013
This is version 11 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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