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G8NTR2 (G8NTR2_GRAMM) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 11. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length661 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m). RuleBase RU000617

Sequence similarities

Belongs to the ATP-dependent DNA ligase family.

Sequences

Sequence LengthMass (Da)Tools
G8NTR2 [UniParc].

Last modified February 22, 2012. Version 1.
Checksum: 7AFAE79C7406B3C9

FASTA66171,326
        10         20         30         40         50         60 
MAFFVALATL AEKLSQEGSR LKKRAAIAEA IASLHAAAPE SSDAGRFALY LAGQPFAEND 

        70         80         90        100        110        120 
ARKLNAGGAL LSRAVLTVAG ADNAQLTAAY RRHGDLGAAA HDLLVAPHGK APSTATLTLD 

       130        140        150        160        170        180 
DVADAFAAMA VARTTAARSS LVEGLLTRAT AVEAKYLLKL MLGDMRIGVK QSLIEEAIAV 

       190        200        210        220        230        240 
ASGTEVAAVR HGVMLEADLV CAVGRAFAGT LAAARMTLFH PLGFMLASPV ETPEAAVERF 

       250        260        270        280        290        300 
TEAPAKEKPA KVAKPKKARK KRVGEDFVDL APVQEVVARD APEEGLAEDA QIEALASGEL 

       310        320        330        340        350        360 
SAGSSGVLAF LEDKYDGMRA QVHCGDPSQP GRVAIYSRNR EDITQSFPEL AEAFAQVEEP 

       370        380        390        400        410        420 
MILDGEILGW DFGKSQALPF AVMGQRIGRK VVSDEVRRQI PAVFMAFDLL FVGDELLLPL 

       430        440        450        460        470        480 
PLTRRRMLLE EVVARWSEHA RSALAADSTR KADQAGLFSE TAPVAEQKTR WMLSPSQPVT 

       490        500        510        520        530        540 
DAAAIDQAYR DARARANEGV MLKRADSAYL PGRRGLAWVK LKRELATLDV VITGAEFGHG 

       550        560        570        580        590        600 
KRAGLLSDYT FAVRGQAGQL LNVGKAYSGL TDAEILEMTA WLKAHTLEDR GYFRTVEPQI 

       610        620        630        640        650        660 
VLEVAFNNIM RSSRHASGFA LRFPRILHIR RDKPVSEIDT LEQVEAVYQT QPDRPDESLE 


E 

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References

[1]"Complete sequence of Granulicella mallensis MP5ACTX8."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Goodwin L., Pitluck S., Peters L., Lu M., Detter J.C., Han C., Tapia R., Land M., Hauser L., Kyrpides N., Ivanova N., Mikhailova N., Pagani I., Rawat S. expand/collapse author list , Mannisto M., Haggblom M., Woyke T.
Submitted (NOV-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC BAA-1857 / DSM 23137 / MP5ACTX8.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003130 Genomic DNA. Translation: AEU36386.1.
RefSeqYP_005057416.1. NC_016631.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEU36386; AEU36386; AciX8_2056.
GeneID11573163.
KEGGgma:AciX8_2056.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK10747.

Enzyme and pathway databases

BioCycGMAL682795:GHBV-2083-MONOMER.

Family and domain databases

Gene3D1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProIPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR00574. dnl1. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameG8NTR2_GRAMM
AccessionPrimary (citable) accession number: G8NTR2
Entry history
Integrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: October 16, 2013
This is version 11 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)