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Protein
Submitted name:

Ribulose-bisphosphate carboxylase

Gene

BYI23_B014300

Organism
Burkholderia sp. YI23
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciBSP1097668:GKEO-5926-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Ribulose-bisphosphate carboxylaseImported
Gene namesi
ORF Names:BYI23_B014300Imported
OrganismiBurkholderia sp. YI23Imported
Taxonomic identifieri1097668 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderia
Proteomesi
  • UP000006801 Componenti: Chromosome 2

Interactioni

Protein-protein interaction databases

STRINGi1097668.BYI23_B014300.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini34 – 157124RuBisCO_large_NInterPro annotationAdd
BLAST
Domaini167 – 474308RuBisCO_largeInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the RuBisCO large chain family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105DT1. Bacteria.
COG1850. LUCA.
KOiK01601.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
HAMAPiMF_01338. RuBisCO_L_type1.
InterProiIPR020878. RuBisCo_large_chain_AS.
IPR020888. RuBisCO_lsu.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

G8MDQ6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNDFSKAAVE AARNPSDPRS RYAAGVMKYR EMGYWQPDYT PKDTDVIALF
60 70 80 90 100
RITPQAGVEP EEAAAAVAGE SSTATWTVVW TDRLTACDMY RAKAYRVDPV
110 120 130 140 150
PNQRADEPQY FAYIAYELDL FEEGSVANLT ASIIGNVFGF KPLKALRLED
160 170 180 190 200
MRIPVAYLKT FQGPPTGIIV ERERLDKYGR PLLGATVKPK LGLSGKNYGR
210 220 230 240 250
VVYEGLKGGL DFLKDDENIN SQAFMHWRDR YLFAMEAVSR AQAETGEVKG
260 270 280 290 300
HYLNVTAGTM EDMYERAEFA KELGSCIVMI DLVIGWTAIQ SMSKWARRND
310 320 330 340 350
MILHLHRAGH GTYTRQRNHG ISFRVIAKWL RMAGVDHAHA GTAVGKLEGD
360 370 380 390 400
PLSVQGYYNV CREARNEPDL SRGIFFDQPW AGLRKVMPVA SGGIHAGQMH
410 420 430 440 450
QLLDLFGDDC ILQFGGGTIG HPQGIQAGAT ANRVALEAMV KARNEGRDIV
460 470 480 490
NEGLDVLDAA ARFCTPLKLA LDTWRDVTFN YASTDTPDFA VTPSVAV
Length:497
Mass (Da):55,048
Last modified:February 22, 2012 - v1
Checksum:i370A0F2ADDB00C72
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003088 Genomic DNA. Translation: AET92037.1.
RefSeqiWP_014251670.1. NC_016625.1.

Genome annotation databases

EnsemblBacteriaiAET92037; AET92037; BYI23_B014300.
KEGGibyi:BYI23_B014300.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003088 Genomic DNA. Translation: AET92037.1.
RefSeqiWP_014251670.1. NC_016625.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi1097668.BYI23_B014300.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAET92037; AET92037; BYI23_B014300.
KEGGibyi:BYI23_B014300.

Phylogenomic databases

eggNOGiENOG4105DT1. Bacteria.
COG1850. LUCA.
KOiK01601.

Enzyme and pathway databases

BioCyciBSP1097668:GKEO-5926-MONOMER.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
HAMAPiMF_01338. RuBisCO_L_type1.
InterProiIPR020878. RuBisCo_large_chain_AS.
IPR020888. RuBisCO_lsu.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete Genome Sequence of the Fenitrothion-Degrading Burkholderia sp. Strain YI23."
    Lim J.S., Choi B.S., Choi A.Y., Kim K.D., Kim D.I., Choi I.Y., Ka J.O.
    J. Bacteriol. 194:896-896(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: YI23Imported.

Entry informationi

Entry nameiG8MDQ6_9BURK
AccessioniPrimary (citable) accession number: G8MDQ6
Entry historyi
Integrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: April 13, 2016
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.