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Protein
Submitted name:

Superoxide dismutase copper/zinc binding protein

Gene

BYI23_A006190

Organism
Burkholderia sp. YI23
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciBSP1097668:GKEO-624-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Superoxide dismutase copper/zinc binding proteinImported
Gene namesi
ORF Names:BYI23_A006190Imported
OrganismiBurkholderia sp. YI23Imported
Taxonomic identifieri1097668 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderia
Proteomesi
  • UP000006801 Componenti: Chromosome 1

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei12 – 3322HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi1097668.BYI23_A006190.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini50 – 178129Sod_CuInterPro annotationAdd
BLAST

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG4108Z7T. Bacteria.
COG2032. LUCA.
KOiK04565.
OrthoDBiPOG091H05EB.

Family and domain databases

Gene3Di2.60.40.200. 1 hit.
InterProiIPR001424. SOD_Cu_Zn_dom.
[Graphical view]
PfamiPF00080. Sod_Cu. 1 hit.
[Graphical view]
SUPFAMiSSF49329. SSF49329. 1 hit.

Sequencei

Sequence statusi: Complete.

G8M5Q0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRHRFDGRAA RTPGALIAMA VFSVMLSGCG LIFQNHEKRA DAVLQPTPGN
60 70 80 90 100
AARGTVTLIE RADGVQVSYS LTDMPPNSDH ALAVHERGDC IAVNDQDASP
110 120 130 140 150
VFALPAERRK ASARLEGELG NIHADATGSA TGFIVATDVS LDGVRSVISR
160 170 180
AIMLHREAMD PYASAPHNVG PALACGVIRR
Length:180
Mass (Da):19,022
Last modified:February 22, 2012 - v1
Checksum:i6A7DB92832171C6D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003087 Genomic DNA. Translation: AET88457.1.
RefSeqiWP_014190692.1. NC_016589.1.

Genome annotation databases

EnsemblBacteriaiAET88457; AET88457; BYI23_A006190.
KEGGibyi:BYI23_A006190.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003087 Genomic DNA. Translation: AET88457.1.
RefSeqiWP_014190692.1. NC_016589.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi1097668.BYI23_A006190.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAET88457; AET88457; BYI23_A006190.
KEGGibyi:BYI23_A006190.

Phylogenomic databases

eggNOGiENOG4108Z7T. Bacteria.
COG2032. LUCA.
KOiK04565.
OrthoDBiPOG091H05EB.

Enzyme and pathway databases

BioCyciBSP1097668:GKEO-624-MONOMER.

Family and domain databases

Gene3Di2.60.40.200. 1 hit.
InterProiIPR001424. SOD_Cu_Zn_dom.
[Graphical view]
PfamiPF00080. Sod_Cu. 1 hit.
[Graphical view]
SUPFAMiSSF49329. SSF49329. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiG8M5Q0_9BURK
AccessioniPrimary (citable) accession number: G8M5Q0
Entry historyi
Integrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: September 7, 2016
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.