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G8M4Z4 (G8M4Z4_9BURK) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:BYI23_A005210 EMBL AET88359.1
OrganismBurkholderia sp. YI23 [Complete proteome] EMBL AET88359.1
Taxonomic identifier1097668 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderia

Protein attributes

Sequence length551 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
G8M4Z4 [UniParc].

Last modified February 22, 2012. Version 1.
Checksum: 5140DDE185671CC8

FASTA55161,100
        10         20         30         40         50         60 
MKRFATLYTA LDATTSTNEK LEALIAYFAG AAPEDAAWAS YFLAGGKPRQ SVPTRLLAEF 

        70         80         90        100        110        120 
ARERAGLPEW LFEESYQAVG DLAETIAHVL PAASGESSLG LAQWIEERVL TLRGASPVEL 

       130        140        150        160        170        180 
RERLLSYWDE LDWSERFLLT KLIGGGFRVG VARQLVVRAL AEIAGVDHKR IAQRMVGWTD 

       190        200        210        220        230        240 
SRQTPSAARY LRLIAPAADG DDVDTPHESD IGLPYPFFLA HPLQTDPATL GATSEWIAEW 

       250        260        270        280        290        300 
KWDGIRAQLV KRAGRVWIWS RGEDLVTERF PELANLGAAL PDGTVIDGEI LAWEPGADAP 

       310        320        330        340        350        360 
LPFARLQPRI TRKSLTKKVL ADSPAALLAY DLLEADGRDL RTEPLHARRA RLDTLAASLA 

       370        380        390        400        410        420 
VDVLRVSPMV AASGWEALAA LREESRARGV EGLMLKERAS MYGVGRTKAS GTWWKWKIDP 

       430        440        450        460        470        480 
YAIDAVLLYA QRGHGRRASL YTDFTFAVWD EADGMRTLVP FAKAYSGLTD EEMRQVDAIV 

       490        500        510        520        530        540 
RKTTIEKFGP VRSVTPTLVF EIGFEGIQAS PRHKSGIAVR FPRMLRWRTD KQIEDADTLD 

       550 
MLKGFLNEAT A 

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References

[1]"Complete Genome Sequence of the Fenitrothion-Degrading Burkholderia sp. Strain YI23."
Lim J.S., Choi B.S., Choi A.Y., Kim K.D., Kim D.I., Choi I.Y., Ka J.O.
J. Bacteriol. 194:896-896(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: YI23 EMBL AET88359.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003087 Genomic DNA. Translation: AET88359.1.
RefSeqYP_004976336.1. NC_016589.1.

3D structure databases

ProteinModelPortalG8M4Z4.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAET88359; AET88359; BYI23_A005210.
GeneID11745902.
KEGGbyi:BYI23_A005210.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.

Enzyme and pathway databases

BioCycBSP1097668:GKEO-525-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR04120. DNA_lig_bact. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameG8M4Z4_9BURK
AccessionPrimary (citable) accession number: G8M4Z4
Entry history
Integrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: January 22, 2014
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)