G8M4Z4 (G8M4Z4_9BURK) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP dependent DNA ligase EMBL AET88359.1

Gene names

ORF Names:

BYI23_A005210 EMBL AET88359.1

Organism

Burkholderia sp. YI23 EMBL AET88359.1

Taxonomic identifier

1097668 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Burkholderiaceae › Burkholderia

Protein attributes

Sequence length	551 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL AET88359.1
Gene Ontology (GO)
Biological_process	DNA ligation involved in DNA repair Inferred from electronic annotation. Source: InterPro DNA recombination Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	G8M4Z4 [UniParc]. Last modified February 22, 2012. Version 1. Checksum: 5140DDE185671CC8	FASTA	551	61,100
	10 20 30 40 50 60 MKRFATLYTA LDATTSTNEK LEALIAYFAG AAPEDAAWAS YFLAGGKPRQ SVPTRLLAEF 70 80 90 100 110 120 ARERAGLPEW LFEESYQAVG DLAETIAHVL PAASGESSLG LAQWIEERVL TLRGASPVEL 130 140 150 160 170 180 RERLLSYWDE LDWSERFLLT KLIGGGFRVG VARQLVVRAL AEIAGVDHKR IAQRMVGWTD 190 200 210 220 230 240 SRQTPSAARY LRLIAPAADG DDVDTPHESD IGLPYPFFLA HPLQTDPATL GATSEWIAEW 250 260 270 280 290 300 KWDGIRAQLV KRAGRVWIWS RGEDLVTERF PELANLGAAL PDGTVIDGEI LAWEPGADAP 310 320 330 340 350 360 LPFARLQPRI TRKSLTKKVL ADSPAALLAY DLLEADGRDL RTEPLHARRA RLDTLAASLA 370 380 390 400 410 420 VDVLRVSPMV AASGWEALAA LREESRARGV EGLMLKERAS MYGVGRTKAS GTWWKWKIDP 430 440 450 460 470 480 YAIDAVLLYA QRGHGRRASL YTDFTFAVWD EADGMRTLVP FAKAYSGLTD EEMRQVDAIV 490 500 510 520 530 540 RKTTIEKFGP VRSVTPTLVF EIGFEGIQAS PRHKSGIAVR FPRMLRWRTD KQIEDADTLD 550 MLKGFLNEAT A

References

[1]	"Complete Genome Sequence of the Fenitrothion-Degrading Burkholderia sp. Strain YI23." Lim J.S., Choi B.S., Choi A.Y., Kim K.D., Kim D.I., Choi I.Y., Ka J.O. J. Bacteriol. 194:896-896(2012) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: YI23 EMBL AET88359.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP003087 Genomic DNA. Translation: AET88359.1.
RefSeq	YP_004976336.1. NC_016589.1.
3D structure databases
ProteinModelPortal	G8M4Z4.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AET88359; AET88359; BYI23_A005210.
GeneID	11745902.
KEGG	byi:BYI23_A005210.
Phylogenomic databases
KO	K01971.
Enzyme and pathway databases
BioCyc	BSP1097668:GKEO-525-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR026333. ATP_dep_DNA_lig_pp_1105_fam. IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR016059. DNA_ligase_ATP-dep_CS. IPR012308. DNA_ligase_ATP-dep_N. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. PF04675. DNA_ligase_A_N. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMs	TIGR04120. DNA_lig_bact. 1 hit.
PROSITE	PS00697. DNA_LIGASE_A1. 1 hit. PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

G8M4Z4_9BURK

Accession

Primary (citable) accession number: G8M4Z4

Entry history

Integrated into UniProtKB/TrEMBL:	February 22, 2012
Last sequence update:	February 22, 2012
Last modified:	May 29, 2013
This is version 11 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)