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G8M4Z4

- G8M4Z4_9BURK

UniProt

G8M4Z4 - G8M4Z4_9BURK

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Protein
Submitted name: ATP dependent DNA ligase
Gene
BYI23_A005210
Organism
Burkholderia sp. YI23
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciBSP1097668:GKEO-525-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
ORF Names:BYI23_A005210Imported
OrganismiBurkholderia sp. YI23Imported
Taxonomic identifieri1097668 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderia
ProteomesiUP000006801: Chromosome 1

Structurei

3D structure databases

ProteinModelPortaliG8M4Z4.

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

G8M4Z4-1 [UniParc]FASTAAdd to Basket

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MKRFATLYTA LDATTSTNEK LEALIAYFAG AAPEDAAWAS YFLAGGKPRQ    50
SVPTRLLAEF ARERAGLPEW LFEESYQAVG DLAETIAHVL PAASGESSLG 100
LAQWIEERVL TLRGASPVEL RERLLSYWDE LDWSERFLLT KLIGGGFRVG 150
VARQLVVRAL AEIAGVDHKR IAQRMVGWTD SRQTPSAARY LRLIAPAADG 200
DDVDTPHESD IGLPYPFFLA HPLQTDPATL GATSEWIAEW KWDGIRAQLV 250
KRAGRVWIWS RGEDLVTERF PELANLGAAL PDGTVIDGEI LAWEPGADAP 300
LPFARLQPRI TRKSLTKKVL ADSPAALLAY DLLEADGRDL RTEPLHARRA 350
RLDTLAASLA VDVLRVSPMV AASGWEALAA LREESRARGV EGLMLKERAS 400
MYGVGRTKAS GTWWKWKIDP YAIDAVLLYA QRGHGRRASL YTDFTFAVWD 450
EADGMRTLVP FAKAYSGLTD EEMRQVDAIV RKTTIEKFGP VRSVTPTLVF 500
EIGFEGIQAS PRHKSGIAVR FPRMLRWRTD KQIEDADTLD MLKGFLNEAT 550
A 551
Length:551
Mass (Da):61,100
Last modified:February 22, 2012 - v1
Checksum:i5140DDE185671CC8
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003087 Genomic DNA. Translation: AET88359.1.
RefSeqiWP_014190595.1. NC_016589.1.
YP_004976336.1. NC_016589.1.

Genome annotation databases

EnsemblBacteriaiAET88359; AET88359; BYI23_A005210.
GeneIDi11745902.
KEGGibyi:BYI23_A005210.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003087 Genomic DNA. Translation: AET88359.1 .
RefSeqi WP_014190595.1. NC_016589.1.
YP_004976336.1. NC_016589.1.

3D structure databases

ProteinModelPortali G8M4Z4.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AET88359 ; AET88359 ; BYI23_A005210 .
GeneIDi 11745902.
KEGGi byi:BYI23_A005210.

Phylogenomic databases

KOi K01971.

Enzyme and pathway databases

BioCyci BSP1097668:GKEO-525-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete Genome Sequence of the Fenitrothion-Degrading Burkholderia sp. Strain YI23."
    Lim J.S., Choi B.S., Choi A.Y., Kim K.D., Kim D.I., Choi I.Y., Ka J.O.
    J. Bacteriol. 194:896-896(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: YI23Imported.

Entry informationi

Entry nameiG8M4Z4_9BURK
AccessioniPrimary (citable) accession number: G8M4Z4
Entry historyi
Integrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: September 3, 2014
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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