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G8M3M4 (G8M3M4_9BURK) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 14. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:BYI23_A015080 EMBL AET89346.1
OrganismBurkholderia sp. YI23 [Complete proteome] EMBL AET89346.1
Taxonomic identifier1097668 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesBurkholderiaceaeBurkholderia

Protein attributes

Sequence length904 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
G8M3M4 [UniParc].

Last modified February 22, 2012. Version 1.
Checksum: 036AFA9893EB882C

FASTA904100,865
        10         20         30         40         50         60 
MAEKLDTYQR MRRFDKTPEP SGAAKRSGGA RAKKTATKKT AKRAMSFVIQ EHDARRLHYD 

        70         80         90        100        110        120 
FRLELDGTLK SWAVPKGPSL DPSVKRLAVH VEDHPLDYGS FEGEIPEGNY GAGSVIVWDR 

       130        140        150        160        170        180 
GTWAPQSGSV EEAAREYEKG KLKFVLDGEK LHGGWTLVKS HMRGSGDKEQ WLLIKERDDE 

       190        200        210        220        230        240 
ARSEAEYDIL LKKPGSVLSE SLGARAKNGA LIDRAERKAA AKKAPARRTA ARKQSDGHAH 

       250        260        270        280        290        300 
PDIVANRSAE SLRTLSHEPA IEGAVKAKLP ATFKPQLATL VDAAPPGEDW AYEIKFDGYR 

       310        320        330        340        350        360 
MLARIETTRG KRDIRIYTRN GNDWSAKFSK QVKALEKLDI ESGWLDGEAV VLDERGLPDF 

       370        380        390        400        410        420 
QALQNAFDAG RPQDIVVYFF DVPYLNGYDL RHVPLVQRRA MLKALIEPVD DSVLRYSQDF 

       430        440        450        460        470        480 
AFHADELLKS ACDMALEGII GKRIDSAYVP GRGNSWIKLK CRRRQEFVIG GYSEPSGSRG 

       490        500        510        520        530        540 
EFGALLLGVY DKSGKLQYAG RVGTGFDQKM LVAVKKELDK RETPRMPFAS EPQERSRTPV 

       550        560        570        580        590        600 
HWVKPELVAE CNFAEWTKER IVRQASFVSL RDDKPARQIV KEEPVAAKKV AAKKTAAVKK 

       610        620        630        640        650        660 
AKASSAEVEG VKISHPDRVI DKSAGYTKLD VVEYYASVAK WMLPHLKDRP VSLVRAPEDI 

       670        680        690        700        710        720 
GGELFFQKHS AKLAIPHITQ HPDIDPGHPP LLTIESSKAL VGTAQMGTIE LHTWNAVASN 

       730        740        750        760        770        780 
IEKPDRMVFD LDPGEGVGWE RMIEAAKLTK ELLAELGLTS FCKTSGGKGF HVVVPLRKHA 

       790        800        810        820        830        840 
DWDEMKAFSQ AVAQHMANAL PKFFSAKMGM QNRKGKIFID YLRNNRGSST VAAFSLRARP 

       850        860        870        880        890        900 
GLGASMPLSW DELDDVTSGD QWNIGNARER LDALKRDPWA DYEKARQRLT AEMKKRLGMN 


GERK 

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References

[1]"Complete Genome Sequence of the Fenitrothion-Degrading Burkholderia sp. Strain YI23."
Lim J.S., Choi B.S., Choi A.Y., Kim K.D., Kim D.I., Choi I.Y., Ka J.O.
J. Bacteriol. 194:896-896(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: YI23 EMBL AET89346.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003087 Genomic DNA. Translation: AET89346.1.
RefSeqYP_004977323.1. NC_016589.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAET89346; AET89346; BYI23_A015080.
GeneID11746313.
KEGGbyi:BYI23_A015080.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.

Enzyme and pathway databases

BioCycBSP1097668:GKEO-1530-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameG8M3M4_9BURK
AccessionPrimary (citable) accession number: G8M3M4
Entry history
Integrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: April 16, 2014
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)