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G8JYB7

- G8JYB7_CAEEL

UniProt

G8JYB7 - G8JYB7_CAEEL

Protein
Submitted name:

Protein HDA-6, isoform d

Gene

hda-6

Organism
Caenorhabditis elegans
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
  1. Functioni

    GO - Molecular functioni

    1. protein deacetylase activity Source: WormBase
    2. zinc ion binding Source: InterPro

    GO - Biological processi

    1. protein deacetylation Source: GOC

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Protein HDA-6, isoform dImported
    Gene namesi
    Name:hda-6Imported
    ORF Names:CELE_F41H10.6Imported, F41H10.6Imported
    OrganismiCaenorhabditis elegansImported
    Taxonomic identifieri6239 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
    ProteomesiUP000001940: Chromosome IV

    Organism-specific databases

    WormBaseiF41H10.6d; CE45122; WBGene00018319; hda-6.

    Structurei

    3D structure databases

    ProteinModelPortaliG8JYB7.
    SMRiG8JYB7. Positions 34-137.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    GeneTreeiENSGT00530000062809.
    KOiK11407.

    Family and domain databases

    Gene3Di3.30.40.10. 1 hit.
    InterProiIPR000286. His_deacetylse.
    IPR013083. Znf_RING/FYVE/PHD.
    IPR001607. Znf_UBP.
    [Graphical view]
    PANTHERiPTHR10625. PTHR10625. 1 hit.
    PfamiPF02148. zf-UBP. 1 hit.
    [Graphical view]
    PROSITEiPS50271. ZF_UBP. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    G8JYB7-1 [UniParc]FASTAAdd to Basket

    « Hide

    MADQSSSSGS SSSSTRPSHN LEIMDSGPAH AVVPLATCPH LKEVKPLPPA    50
    KINARTACSE CQIGAEVWTC LTCYKYNCGR FVNEHAMMHH LSSSHPMALS 100
    MADLSVWCYP CDSYVHNPAL IGAKSAAHES KFGETMPS 138
    Length:138
    Mass (Da):14,821
    Last modified:January 25, 2012 - v1
    Checksum:i7EF0BD87087304C2
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FO081367 Genomic DNA. Translation: CCD71107.1.
    RefSeqiNP_001255270.1. NM_001268341.1.
    UniGeneiCel.12964.

    Genome annotation databases

    EnsemblMetazoaiF41H10.6d; F41H10.6d; WBGene00018319.
    GeneIDi177316.
    KEGGicel:CELE_F41H10.6.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FO081367 Genomic DNA. Translation: CCD71107.1 .
    RefSeqi NP_001255270.1. NM_001268341.1.
    UniGenei Cel.12964.

    3D structure databases

    ProteinModelPortali G8JYB7.
    SMRi G8JYB7. Positions 34-137.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblMetazoai F41H10.6d ; F41H10.6d ; WBGene00018319 .
    GeneIDi 177316.
    KEGGi cel:CELE_F41H10.6.

    Organism-specific databases

    CTDi 177316.
    WormBasei F41H10.6d ; CE45122 ; WBGene00018319 ; hda-6.

    Phylogenomic databases

    GeneTreei ENSGT00530000062809.
    KOi K11407.

    Family and domain databases

    Gene3Di 3.30.40.10. 1 hit.
    InterProi IPR000286. His_deacetylse.
    IPR013083. Znf_RING/FYVE/PHD.
    IPR001607. Znf_UBP.
    [Graphical view ]
    PANTHERi PTHR10625. PTHR10625. 1 hit.
    Pfami PF02148. zf-UBP. 1 hit.
    [Graphical view ]
    PROSITEi PS50271. ZF_UBP. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
      The C. elegans sequencing consortium
      Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Bristol N2Imported.

    Entry informationi

    Entry nameiG8JYB7_CAEEL
    AccessioniPrimary (citable) accession number: G8JYB7
    Entry historyi
    Integrated into UniProtKB/TrEMBL: January 25, 2012
    Last sequence update: January 25, 2012
    Last modified: October 1, 2014
    This is version 21 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3