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Protein
Submitted name:

C2H2-type zinc finger protein 1

Gene
N/A
Organism
Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
C2H2-type zinc finger protein 1Imported
OrganismiPopulus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa)Imported
Taxonomic identifieri3694 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsMalpighialesSalicaceaeSaliceaePopulus

Interactioni

Protein-protein interaction databases

STRINGi3694.POPTR_0010s21650.1.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini47 – 74C2H2-typeInterPro annotationAdd BLAST28
Domaini92 – 114C2H2-typeInterPro annotationAdd BLAST23

Phylogenomic databases

eggNOGiKOG1721. Eukaryota.
COG5048. LUCA.

Family and domain databases

InterProiView protein in InterPro
IPR013087. Znf_C2H2_type.
SMARTiView protein in SMART
SM00355. ZnF_C2H2. 2 hits.
SUPFAMiSSF57667. SSF57667. 1 hit.
PROSITEiView protein in PROSITE
PS00028. ZINC_FINGER_C2H2_1. 2 hits.
PS50157. ZINC_FINGER_C2H2_2. 2 hits.

Sequencei

Sequence statusi: Complete.

G8IEK9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKRGLHEREI DSITMANCLM FLSKGRESYS FPSFDHAMSN ISPARVFECK
60 70 80 90 100
TCNRQFPSFQ ALGGHRASHK KPRLMGGEGS FETQSPAKPK THECSICGLE
110 120 130 140 150
FAIGQALGGH MRRHRAALND RNQVDPLNPP STDDQKAVPV VKRSNSRRVL
160 170
CLDLNLTPYE NDMELFKLGT TAPMVNCFF
Length:179
Mass (Da):20,060
Last modified:December 11, 2013 - v1
Checksum:i0FD2BE613455904C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
JN700523 mRNA. Translation: AES12473.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
JN700523 mRNA. Translation: AES12473.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3694.POPTR_0010s21650.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

eggNOGiKOG1721. Eukaryota.
COG5048. LUCA.

Family and domain databases

InterProiView protein in InterPro
IPR013087. Znf_C2H2_type.
SMARTiView protein in SMART
SM00355. ZnF_C2H2. 2 hits.
SUPFAMiSSF57667. SSF57667. 1 hit.
PROSITEiView protein in PROSITE
PS00028. ZINC_FINGER_C2H2_1. 2 hits.
PS50157. ZINC_FINGER_C2H2_2. 2 hits.
ProtoNetiSearch...

Entry informationi

Entry nameiG8IEK9_POPTR
AccessioniPrimary (citable) accession number: G8IEK9
Entry historyiIntegrated into UniProtKB/TrEMBL: December 11, 2013
Last sequence update: December 11, 2013
Last modified: May 10, 2017
This is version 14 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.