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Protein
Submitted name:

C2H2 family protein

Gene

POPTR_010G209400v3

Organism
Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Keywordsi

LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
C2H2 family proteinImported
Submitted name:
C2H2-type zinc finger protein 1Imported
Gene namesi
ORF Names:POPTR_010G209400v3Imported
OrganismiPopulus trichocarpa (Western balsam poplar) (Populus balsamifera subsp. trichocarpa)Imported
Taxonomic identifieri3694 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsMalpighialesSalicaceaeSaliceaePopulus
Proteomesi
  • UP000006729 Componenti: Chromosome 10

Expressioni

Gene expression databases

ExpressionAtlasiG8IEK9 baseline and differential

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini47 – 74C2H2-typeInterPro annotationAdd BLAST28
Domaini92 – 114C2H2-typeInterPro annotationAdd BLAST23

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG1721 Eukaryota
COG5048 LUCA

Family and domain databases

InterProiView protein in InterPro
IPR036236 Znf_C2H2_sf
IPR013087 Znf_C2H2_type
SMARTiView protein in SMART
SM00355 ZnF_C2H2, 2 hits
SUPFAMiSSF57667 SSF57667, 1 hit
PROSITEiView protein in PROSITE
PS00028 ZINC_FINGER_C2H2_1, 2 hits
PS50157 ZINC_FINGER_C2H2_2, 2 hits

Sequencei

Sequence statusi: Complete.

G8IEK9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKRGLHEREI DSITMANCLM FLSKGRESYS FPSFDHAMSN ISPARVFECK
60 70 80 90 100
TCNRQFPSFQ ALGGHRASHK KPRLMGGEGS FETQSPAKPK THECSICGLE
110 120 130 140 150
FAIGQALGGH MRRHRAALND RNQVDPLNPP STDDQKAVPV VKRSNSRRVL
160 170
CLDLNLTPYE NDMELFKLGT TAPMVNCFF
Length:179
Mass (Da):20,060
Last modified:December 11, 2013 - v1
Checksum:i0FD2BE613455904C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
JN700523 mRNA Translation: AES12473.1
KX273732 mRNA Translation: AOF43487.1
CM009299 Genomic DNA Translation: PNT17804.1

Genome annotation databases

EnsemblPlantsiPOPTR_0010s21650.1; POPTR_0010s21650.1; POPTR_0010s21650
GrameneiPOPTR_0010s21650.1; POPTR_0010s21650.1; POPTR_0010s21650

Similar proteinsi

Entry informationi

Entry nameiG8IEK9_POPTR
AccessioniPrimary (citable) accession number: G8IEK9
Entry historyiIntegrated into UniProtKB/TrEMBL: December 11, 2013
Last sequence update: December 11, 2013
Last modified: May 23, 2018
This is version 22 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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