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G8AMN4

- G8AMN4_AZOBR

UniProt

G8AMN4 - G8AMN4_AZOBR

Protein
Submitted name:

DNA ligase, ATP-dependent

Gene

AZOBR_140226

Organism
Azospirillum brasilense Sp245
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 12 (01 Oct 2014)
      Sequence version 1 (25 Jan 2012)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA ligase, ATP-dependentImported (EC:6.5.1.1Imported)
    Gene namesi
    ORF Names:AZOBR_140226Imported
    OrganismiAzospirillum brasilense Sp245Imported
    Taxonomic identifieri1064539 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodospirillalesRhodospirillaceaeAzospirillum
    ProteomesiUP000007319: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliG8AMN4.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    G8AMN4-1 [UniParc]FASTAAdd to Basket

    « Hide

    MRNFSALIDG LVFMPARNGK IRLLADFFAT TPDPDRGWAL AALTESLVFH    50
    EAKPAAIRQL VATRVDPELF ALSYDYVGDL AETVALIWPE RPERANSLPP 100
    SMTEVVETLR AAKRGQVMGL VEGWLDTLDS SGRFALLKLI TGSLRVGVSA 150
    RLAKTALAEW GKVDLGDLEE CWHGLTPPYA ELFAWLEGRS DRPAAGKGAG 200
    FRPLMLSHPL EEEDMGGLDP ADYAAEWKWD GIRVQLAARG GERRIYSRTG 250
    DDVSGAFPDI ADHMTFDAVL DGELLVARDE GEIAPFNDLQ QRLNRKTVTA 300
    AMLKEFPAWV RLYDILFDGE EDLRSLPFTE RRARLERWHD AVRPRRMDLS 350
    PLVPFEGWEA LKGLREGSRE NSIEGLMLKR KDSVYVAGRP KGPWFKWKRG 400
    ALTLDTVLMY AQRGHGKRSS YYSDFTFGVW RGEELVPVGK AYFGFTDAEL 450
    VELDRWVRNR TTRRYGPVRE VEPGLVLEVA FDSVHPSNRH KSGLAMRFPR 500
    VHRIRWDKPA VEADRLETLQ AMVVG 525
    Length:525
    Mass (Da):59,221
    Last modified:January 25, 2012 - v1
    Checksum:i3B5C54F327B6D3A8
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    HE577327 Genomic DNA. Translation: CCC98496.1.
    RefSeqiYP_005031886.1. NC_016617.1.

    Genome annotation databases

    EnsemblBacteriaiCCC98496; CCC98496; AZOBR_140226.
    GeneIDi13107200.
    KEGGiabs:AZOBR_140226.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    HE577327 Genomic DNA. Translation: CCC98496.1 .
    RefSeqi YP_005031886.1. NC_016617.1.

    3D structure databases

    ProteinModelPortali G8AMN4.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CCC98496 ; CCC98496 ; AZOBR_140226 .
    GeneIDi 13107200.
    KEGGi abs:AZOBR_140226.

    Phylogenomic databases

    KOi K01971.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

    Entry informationi

    Entry nameiG8AMN4_AZOBR
    AccessioniPrimary (citable) accession number: G8AMN4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: January 25, 2012
    Last sequence update: January 25, 2012
    Last modified: October 1, 2014
    This is version 12 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3