G8AMN4 (G8AMN4_AZOBR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
DNA ligase, ATP-dependent EMBL CCC98496.1
EC=6.5.1.1 EMBL CCC98496.1

Gene names

ORF Names:

AZOBR_140226 EMBL CCC98496.1

Organism

Azospirillum brasilense Sp245 EMBL CCC98496.1

Taxonomic identifier

1064539 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhodospirillales › Rhodospirillaceae › Azospirillum › Azospirillum brasilense

Protein attributes

Sequence length	525 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL CCC98496.1
Gene Ontology (GO)
Biological_process	DNA ligation involved in DNA repair Inferred from electronic annotation. Source: InterPro DNA recombination Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	G8AMN4 [UniParc]. Last modified January 25, 2012. Version 1. Checksum: 3B5C54F327B6D3A8	FASTA	525	59,221
	10 20 30 40 50 60 MRNFSALIDG LVFMPARNGK IRLLADFFAT TPDPDRGWAL AALTESLVFH EAKPAAIRQL 70 80 90 100 110 120 VATRVDPELF ALSYDYVGDL AETVALIWPE RPERANSLPP SMTEVVETLR AAKRGQVMGL 130 140 150 160 170 180 VEGWLDTLDS SGRFALLKLI TGSLRVGVSA RLAKTALAEW GKVDLGDLEE CWHGLTPPYA 190 200 210 220 230 240 ELFAWLEGRS DRPAAGKGAG FRPLMLSHPL EEEDMGGLDP ADYAAEWKWD GIRVQLAARG 250 260 270 280 290 300 GERRIYSRTG DDVSGAFPDI ADHMTFDAVL DGELLVARDE GEIAPFNDLQ QRLNRKTVTA 310 320 330 340 350 360 AMLKEFPAWV RLYDILFDGE EDLRSLPFTE RRARLERWHD AVRPRRMDLS PLVPFEGWEA 370 380 390 400 410 420 LKGLREGSRE NSIEGLMLKR KDSVYVAGRP KGPWFKWKRG ALTLDTVLMY AQRGHGKRSS 430 440 450 460 470 480 YYSDFTFGVW RGEELVPVGK AYFGFTDAEL VELDRWVRNR TTRRYGPVRE VEPGLVLEVA 490 500 510 520 FDSVHPSNRH KSGLAMRFPR VHRIRWDKPA VEADRLETLQ AMVVG

References

[1]

"Azospirillum genomes reveal transition of bacteria from aquatic to terrestrial environments." Wisniewski-Dye F., Borziak K., Khalsa-Moyers G., Alexandre G., Sukharnikov L.O., Wuichet K., Hurst G.B., McDonald W.H., Robertson J.S., Barbe V., Calteau A., Rouy Z., Mangenot S., Prigent-Combaret C., Normand P., Boyer M., Siguier P., Dessaux Y. , Elmerich C., Condemine G., Krishnen G., Kennedy I., Paterson A.H., Gonzalez V., Mavingui P., Zhulin I.B. PLoS Genet. 7:e1002430-e1002430(2011) Cited for: NUCLEOTIDE SEQUENCE. Strain: Sp245 EMBL CCC98496.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	HE577327 Genomic DNA. Translation: CCC98496.1.
RefSeq	YP_005031886.1. NC_016617.1.
3D structure databases
ProteinModelPortal	G8AMN4.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CCC98496; CCC98496; AZOBR_140226.
GeneID	13107200.
KEGG	abs:AZOBR_140226.
Phylogenomic databases
KO	K01971.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR026333. ATP_dep_DNA_lig_pp_1105_fam. IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR016059. DNA_ligase_ATP-dep_CS. IPR012308. DNA_ligase_ATP-dep_N. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. PF04675. DNA_ligase_A_N. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMs	TIGR04120. DNA_lig_bact. 1 hit.
PROSITE	PS00697. DNA_LIGASE_A1. 1 hit. PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

G8AMN4_AZOBR

Accession

Primary (citable) accession number: G8AMN4

Entry history

Integrated into UniProtKB/TrEMBL:	January 25, 2012
Last sequence update:	January 25, 2012
Last modified:	April 3, 2013
This is version 8 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)