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G7ZAR7

- G7ZAR7_AZOL4

UniProt

G7ZAR7 - G7ZAR7_AZOL4

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Protein

Ribulose bisphosphate carboxylase large chain

Gene

cbbL

Organism
Azospirillum lipoferum (strain 4B)
Status
Unreviewed - Annotation score: 3 out of 5- Protein inferred from homologyi

Functioni

RuBisCO catalyzes two reactions: the carboxylation of D-ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site.UniRule annotation

Catalytic activityi

2 3-phospho-D-glycerate + 2 H+ = D-ribulose 1,5-bisphosphate + CO2 + H2O.UniRule annotation
3-phospho-D-glycerate + 2-phosphoglycolate = D-ribulose 1,5-bisphosphate + O2.UniRule annotation

Cofactori

Binds 1 magnesium ion per subunit.UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei137 – 1371Substrate; in homodimeric partnerUniRule annotation
Binding sitei187 – 1871SubstrateUniRule annotation
Active sitei189 – 1891Proton acceptorUniRule annotation
Binding sitei191 – 1911SubstrateUniRule annotation
Metal bindingi215 – 2151Magnesium; via carbamate groupUniRule annotation
Metal bindingi217 – 2171MagnesiumUniRule annotation
Metal bindingi218 – 2181MagnesiumUniRule annotation
Active sitei307 – 3071Proton acceptorUniRule annotation
Binding sitei308 – 3081SubstrateUniRule annotation
Binding sitei340 – 3401SubstrateUniRule annotation
Sitei347 – 3471Transition state stabilizerUniRule annotation
Binding sitei392 – 3921SubstrateUniRule annotation

GO - Molecular functioni

  1. magnesium ion binding Source: UniProtKB-HAMAP
  2. monooxygenase activity Source: UniProtKB-KW
  3. ribulose-bisphosphate carboxylase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. reductive pentose-phosphate cycle Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotationImported, MonooxygenaseUniRule annotation, Oxidoreductase

Keywords - Biological processi

Calvin cycleUniRule annotation, Carbon dioxide fixationUniRule annotation

Keywords - Ligandi

MagnesiumUniRule annotation, Metal-bindingUniRule annotation

Enzyme and pathway databases

BioCyciALIP862719:GJAA-3592-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Ribulose bisphosphate carboxylase large chainUniRule annotation (EC:4.1.1.39UniRule annotation)
Short name:
RuBisCO large subunitUniRule annotation
Gene namesi
Name:cbbLUniRule annotationImported
Ordered Locus Names:AZOLI_p10724Imported
Encoded oniPlasmid AZO_p1Imported
OrganismiAzospirillum lipoferum (strain 4B)Imported
Taxonomic identifieri862719 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodospirillalesRhodospirillaceaeAzospirillum
ProteomesiUP000005667: Plasmid AZO_p1

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei215 – 2151N6-carboxylysineUniRule annotation

Interactioni

Subunit structurei

Heterohexadecamer of 8 large chains and 8 small chains.UniRule annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the RuBisCO large chain family. Type I subfamily.UniRule annotation

Phylogenomic databases

KOiK01601.
OMAiCTPLKQA.

Family and domain databases

Gene3Di3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
HAMAPiMF_01338. RuBisCO_L_type1.
InterProiIPR020878. RuBisCo_large_chain_AS.
IPR020888. RuBisCO_lsu.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
[Graphical view]
PfamiPF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view]
SUPFAMiSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

G7ZAR7-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MNYVSTTLPT DQKAADGVVS DPKARYRPGV LKYRQMGYWE PDYQPKDTDV
60 70 80 90 100
LAVFRITPQD GVDPEEAAAA VAGESSTATW TVVWTDRLTD CERYRAKAFR
110 120 130 140 150
VDPVPGAPGQ YFAYIAYELD LFEEGSIANL TASIIGNVFG FKPLKGLRLE
160 170 180 190 200
DMRIPVAYLK TFQGPATGIV VERERLNNFG RPLLGATMKP KLGLSGRNYG
210 220 230 240 250
RVVYEALKGG LDFTKDDENI NSQPFMHWRD RFLYCMEGVN RAIAETGEIK
260 270 280 290 300
GTYLNVTAAT MEDMYERAEF AKELGSVIVM IDLVIGYTAI QSMAKWARRN
310 320 330 340 350
DMILHLHRAG HSTYTRQKSH GVSFRVIAKW MRMAGVDHIH AGTVVGKLEG
360 370 380 390 400
DPNVIRGIYD TCRETHVPQN LQHGIFFDQP WAGLKRVMPV ASGGIHAGQM
410 420 430 440 450
HQLLTYLGED VILQFGGGTI GHPDGIQAGA TANRVALEVM VKARNEGRDI
460 470 480 490
WNEGPEILRD AARWCAPLRA ALDTWKDVTF DYASTDSVDY VPTPTAAM
Length:498
Mass (Da):55,364
Last modified:January 25, 2012 - v1
Checksum:iD376615CBE745A2D
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FQ311869 Genomic DNA. Translation: CBS88950.1.
RefSeqiWP_014188404.1. NC_016585.1.
YP_004974125.1. NC_016585.1.

Genome annotation databases

EnsemblBacteriaiCBS88950; CBS88950; AZOLI_p10724.
GeneIDi11622069.
KEGGiali:AZOLI_p10724.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
FQ311869 Genomic DNA. Translation: CBS88950.1 .
RefSeqi WP_014188404.1. NC_016585.1.
YP_004974125.1. NC_016585.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CBS88950 ; CBS88950 ; AZOLI_p10724 .
GeneIDi 11622069.
KEGGi ali:AZOLI_p10724.

Phylogenomic databases

KOi K01601.
OMAi CTPLKQA.

Enzyme and pathway databases

BioCyci ALIP862719:GJAA-3592-MONOMER.

Family and domain databases

Gene3Di 3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
HAMAPi MF_01338. RuBisCO_L_type1.
InterProi IPR020878. RuBisCo_large_chain_AS.
IPR020888. RuBisCO_lsu.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
IPR017444. RuBisCO_lsu_N.
[Graphical view ]
Pfami PF00016. RuBisCO_large. 1 hit.
PF02788. RuBisCO_large_N. 1 hit.
[Graphical view ]
SUPFAMi SSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEi PS00157. RUBISCO_LARGE. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 4BImported.

Entry informationi

Entry nameiG7ZAR7_AZOL4
AccessioniPrimary (citable) accession number: G7ZAR7
Entry historyi
Integrated into UniProtKB/TrEMBL: January 25, 2012
Last sequence update: January 25, 2012
Last modified: October 29, 2014
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Miscellaneous

The basic functional RuBisCO is composed of a large chain homodimer in a "head-to-tail" conformation. In form I RuBisCO this homodimer is arranged in a barrel-like tetramer with the small subunits forming a tetrameric "cap" on each end of the "barrel".UniRule annotation

Keywords - Technical termi

Complete proteome, PlasmidImported, Reference proteomeImported

External Data

Dasty 3