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G7ZAR7

- G7ZAR7_AZOL4

UniProt

G7ZAR7 - G7ZAR7_AZOL4

Protein

Ribulose bisphosphate carboxylase large chain

Gene

cbbL

Organism
Azospirillum lipoferum (strain 4B)
Status
Unreviewed - Annotation score: 3 out of 5- Protein inferred from homologyi
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    • History
      Entry version 21 (01 Oct 2014)
      Sequence version 1 (25 Jan 2012)
      Previous versions | rss
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    Functioni

    RuBisCO catalyzes two reactions: the carboxylation of D-ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site.UniRule annotation

    Catalytic activityi

    2 3-phospho-D-glycerate + 2 H+ = D-ribulose 1,5-bisphosphate + CO2 + H2O.UniRule annotation
    3-phospho-D-glycerate + 2-phosphoglycolate = D-ribulose 1,5-bisphosphate + O2.UniRule annotation

    Cofactori

    Binds 1 magnesium ion per subunit.UniRule annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Binding sitei137 – 1371Substrate; in homodimeric partnerUniRule annotation
    Binding sitei187 – 1871SubstrateUniRule annotation
    Active sitei189 – 1891Proton acceptorUniRule annotation
    Binding sitei191 – 1911SubstrateUniRule annotation
    Metal bindingi215 – 2151Magnesium; via carbamate groupUniRule annotation
    Metal bindingi217 – 2171MagnesiumUniRule annotation
    Metal bindingi218 – 2181MagnesiumUniRule annotation
    Active sitei307 – 3071Proton acceptorUniRule annotation
    Binding sitei308 – 3081SubstrateUniRule annotation
    Binding sitei340 – 3401SubstrateUniRule annotation
    Sitei347 – 3471Transition state stabilizerUniRule annotation
    Binding sitei392 – 3921SubstrateUniRule annotation

    GO - Molecular functioni

    1. magnesium ion binding Source: UniProtKB-HAMAP
    2. monooxygenase activity Source: UniProtKB-KW
    3. ribulose-bisphosphate carboxylase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. reductive pentose-phosphate cycle Source: UniProtKB-KW

    Keywords - Molecular functioni

    LyaseUniRule annotationImported, MonooxygenaseUniRule annotation, Oxidoreductase

    Keywords - Biological processi

    Calvin cycleUniRule annotation, Carbon dioxide fixationUniRule annotation

    Keywords - Ligandi

    MagnesiumUniRule annotation, Metal-bindingUniRule annotation

    Enzyme and pathway databases

    BioCyciALIP862719:GJAA-3592-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Ribulose bisphosphate carboxylase large chainUniRule annotation (EC:4.1.1.39UniRule annotation)
    Short name:
    RuBisCO large subunitUniRule annotation
    Gene namesi
    Name:cbbLUniRule annotationImported
    Ordered Locus Names:AZOLI_p10724Imported
    Encoded oniPlasmid AZO_p1Imported
    OrganismiAzospirillum lipoferum (strain 4B)Imported
    Taxonomic identifieri862719 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhodospirillalesRhodospirillaceaeAzospirillum
    ProteomesiUP000005667: Plasmid AZO_p1

    PTM / Processingi

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Modified residuei215 – 2151N6-carboxylysineUniRule annotation

    Interactioni

    Subunit structurei

    Heterohexadecamer of 8 large chains and 8 small chains.UniRule annotation

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the RuBisCO large chain family. Type I subfamily.UniRule annotation

    Phylogenomic databases

    KOiK01601.
    OMAiCTPLKQA.

    Family and domain databases

    Gene3Di3.20.20.110. 1 hit.
    3.30.70.150. 1 hit.
    HAMAPiMF_01338. RuBisCO_L_type1.
    InterProiIPR020878. RuBisCo_large_chain_AS.
    IPR020888. RuBisCO_lsu.
    IPR000685. RuBisCO_lsu_C.
    IPR017443. RuBisCO_lsu_fd_N.
    IPR017444. RuBisCO_lsu_N.
    [Graphical view]
    PfamiPF00016. RuBisCO_large. 1 hit.
    PF02788. RuBisCO_large_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF51649. SSF51649. 1 hit.
    SSF54966. SSF54966. 1 hit.
    PROSITEiPS00157. RUBISCO_LARGE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    G7ZAR7-1 [UniParc]FASTAAdd to Basket

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    MNYVSTTLPT DQKAADGVVS DPKARYRPGV LKYRQMGYWE PDYQPKDTDV    50
    LAVFRITPQD GVDPEEAAAA VAGESSTATW TVVWTDRLTD CERYRAKAFR 100
    VDPVPGAPGQ YFAYIAYELD LFEEGSIANL TASIIGNVFG FKPLKGLRLE 150
    DMRIPVAYLK TFQGPATGIV VERERLNNFG RPLLGATMKP KLGLSGRNYG 200
    RVVYEALKGG LDFTKDDENI NSQPFMHWRD RFLYCMEGVN RAIAETGEIK 250
    GTYLNVTAAT MEDMYERAEF AKELGSVIVM IDLVIGYTAI QSMAKWARRN 300
    DMILHLHRAG HSTYTRQKSH GVSFRVIAKW MRMAGVDHIH AGTVVGKLEG 350
    DPNVIRGIYD TCRETHVPQN LQHGIFFDQP WAGLKRVMPV ASGGIHAGQM 400
    HQLLTYLGED VILQFGGGTI GHPDGIQAGA TANRVALEVM VKARNEGRDI 450
    WNEGPEILRD AARWCAPLRA ALDTWKDVTF DYASTDSVDY VPTPTAAM 498
    Length:498
    Mass (Da):55,364
    Last modified:January 25, 2012 - v1
    Checksum:iD376615CBE745A2D
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FQ311869 Genomic DNA. Translation: CBS88950.1.
    RefSeqiWP_014188404.1. NC_016585.1.
    YP_004974125.1. NC_016585.1.

    Genome annotation databases

    EnsemblBacteriaiCBS88950; CBS88950; AZOLI_p10724.
    GeneIDi11622069.
    KEGGiali:AZOLI_p10724.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FQ311869 Genomic DNA. Translation: CBS88950.1 .
    RefSeqi WP_014188404.1. NC_016585.1.
    YP_004974125.1. NC_016585.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CBS88950 ; CBS88950 ; AZOLI_p10724 .
    GeneIDi 11622069.
    KEGGi ali:AZOLI_p10724.

    Phylogenomic databases

    KOi K01601.
    OMAi CTPLKQA.

    Enzyme and pathway databases

    BioCyci ALIP862719:GJAA-3592-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.110. 1 hit.
    3.30.70.150. 1 hit.
    HAMAPi MF_01338. RuBisCO_L_type1.
    InterProi IPR020878. RuBisCo_large_chain_AS.
    IPR020888. RuBisCO_lsu.
    IPR000685. RuBisCO_lsu_C.
    IPR017443. RuBisCO_lsu_fd_N.
    IPR017444. RuBisCO_lsu_N.
    [Graphical view ]
    Pfami PF00016. RuBisCO_large. 1 hit.
    PF02788. RuBisCO_large_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51649. SSF51649. 1 hit.
    SSF54966. SSF54966. 1 hit.
    PROSITEi PS00157. RUBISCO_LARGE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 4BImported.

    Entry informationi

    Entry nameiG7ZAR7_AZOL4
    AccessioniPrimary (citable) accession number: G7ZAR7
    Entry historyi
    Integrated into UniProtKB/TrEMBL: January 25, 2012
    Last sequence update: January 25, 2012
    Last modified: October 1, 2014
    This is version 21 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Miscellaneous

    The basic functional RuBisCO is composed of a large chain homodimer in a "head-to-tail" conformation. In form I RuBisCO this homodimer is arranged in a barrel-like tetramer with the small subunits forming a tetrameric "cap" on each end of the "barrel".UniRule annotation

    Keywords - Technical termi

    Complete proteome, PlasmidImported, Reference proteomeImported

    External Data

    Dasty 3