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G7Z1Z4 (G7Z1Z4_AZOL4) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 17. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
D-alanine--D-alanine ligase HAMAP-Rule MF_00047

EC=6.3.2.4 HAMAP-Rule MF_00047
Alternative name(s):
D-Ala-D-Ala ligase HAMAP-Rule MF_00047
D-alanylalanine synthetase HAMAP-Rule MF_00047
Gene names
Name:ddlB EMBL CBS87364.1
Synonyms:ddl HAMAP-Rule MF_00047
Ordered Locus Names:AZOLI_2134 EMBL CBS87364.1
OrganismAzospirillum lipoferum (strain 4B) [Complete proteome] [HAMAP] EMBL CBS87364.1
Taxonomic identifier862719 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhodospirillalesRhodospirillaceaeAzospirillum

Protein attributes

Sequence length319 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Cell wall formation By similarity. HAMAP-Rule MF_00047 SAAS SAAS005905

Catalytic activity

ATP + 2 D-alanine = ADP + phosphate + D-alanyl-D-alanine. HAMAP-Rule MF_00047 SAAS SAAS005905

Cofactor

Binds 2 magnesium or manganese ions per subunit By similarity. HAMAP-Rule MF_00047 SAAS SAAS005905

Pathway

Cell wall biogenesis; peptidoglycan biosynthesis. HAMAP-Rule MF_00047 SAAS SAAS005905

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00047 SAAS SAAS005905.

Sequence similarities

Belongs to the D-alanine--D-alanine ligase family. HAMAP-Rule MF_00047

Contains 1 ATP-grasp domain. HAMAP-Rule MF_00047

Contains ATP-grasp domain. SAAS SAAS005905

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Domain112 – 312201ATP-grasp By similarity HAMAP-Rule MF_00047
Nucleotide binding138 – 19457ATP By similarity HAMAP-Rule MF_00047

Sites

Metal binding2621Magnesium or manganese 1 By similarity HAMAP-Rule MF_00047
Metal binding2791Magnesium or manganese 1 By similarity HAMAP-Rule MF_00047
Metal binding2791Magnesium or manganese 2 By similarity HAMAP-Rule MF_00047
Metal binding2811Magnesium or manganese 2 By similarity HAMAP-Rule MF_00047

Sequences

Sequence LengthMass (Da)Tools
G7Z1Z4 [UniParc].

Last modified January 25, 2012. Version 1.
Checksum: 122F00431679F5B6

FASTA31933,812
        10         20         30         40         50         60 
MTEVLLHAHK KHVAVLMGGW SAEREVSLVS GAGVAKALEE EGYRVTAIDV QRDLGGLMHA 

        70         80         90        100        110        120 
LTNPRPDVVF NALHGRGGED GTIQGVLEFL GLPYTHSGVQ AAAIAMDKAM TKRVLDTVGI 

       130        140        150        160        170        180 
RSPKGMVLSR GEIAGGAHPM PAPYIVKPVD EGSTVGVTLV REGQNSPVGD DGFFGGTFGE 

       190        200        210        220        230        240 
RVLVEEFIPG RELTVGVMGD RALAVTEIVF QAQVYDYTAK YSAGHAVHTI PAAIPEAVAE 

       250        260        270        280        290        300 
EAKRMAVLAH HTLGCRGVSR SDFRWDDGRP GTDGLYFLEI NNQPGMTPLS LVPEQAAHVG 

       310 
ISYGALVGWL VENAACQLA 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FQ311868 Genomic DNA. Translation: CBS87364.1.
RefSeqYP_005039581.1. NC_016622.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCBS87364; CBS87364; AZOLI_2134.
GeneID11555765.
KEGGali:AZOLI_2134.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01921.
OMAKYTEGFA.

Enzyme and pathway databases

BioCycALIP862719:GJAA-1971-MONOMER.
UniPathwayUPA00219.

Family and domain databases

Gene3D3.30.1490.20. 1 hit.
3.30.470.20. 2 hits.
3.40.50.20. 1 hit.
HAMAPMF_00047. Dala_Dala_lig.
InterProIPR011761. ATP-grasp.
IPR013815. ATP_grasp_subdomain_1.
IPR013816. ATP_grasp_subdomain_2.
IPR000291. D-Ala_lig_Van_CS.
IPR005905. D_ala_D_ala.
IPR011095. Dala_Dala_lig_C.
IPR011127. Dala_Dala_lig_N.
IPR016185. PreATP-grasp_dom.
[Graphical view]
PANTHERPTHR23132. PTHR23132. 1 hit.
PfamPF07478. Dala_Dala_lig_C. 1 hit.
PF01820. Dala_Dala_lig_N. 2 hits.
[Graphical view]
SUPFAMSSF52440. SSF52440. 1 hit.
TIGRFAMsTIGR01205. D_ala_D_alaTIGR. 1 hit.
PROSITEPS50975. ATP_GRASP. 1 hit.
PS00843. DALA_DALA_LIGASE_1. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameG7Z1Z4_AZOL4
AccessionPrimary (citable) accession number: G7Z1Z4
Entry history
Integrated into UniProtKB/TrEMBL: January 25, 2012
Last sequence update: January 25, 2012
Last modified: February 19, 2014
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)