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Protein

Alpha-amylase

Gene

HPL003_21345

Organism
Paenibacillus terrae (strain HPL-003)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

GO - Molecular functioni

  1. alpha-amylase activity Source: UniProtKB-EC
  2. cation binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotation, Hydrolase

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Enzyme and pathway databases

BioCyciPTER985665:GHT3-4321-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:HPL003_21345Imported
OrganismiPaenibacillus terrae (strain HPL-003)Imported
Taxonomic identifieri985665 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesPaenibacillaceaePaenibacillus
ProteomesiUP000005876: Chromosome

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Phylogenomic databases

KOiK01176.
OMAiAYANYMN.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

G7VPK1-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MRRTWSIVLF VVLLLQTIGF TPEAQANADV QQLGGSDSKL IAATNYELPE
60 70 80 90 100
RTKDGLIFHA WNWSFANITR NLPELAQAGF KAVQTSPIQA NKEGLTEGSK
110 120 130 140 150
WWILYQPINF NIGNSQLGSR EDFRQLCQEA HKYGISVIVD VVANHTGNAG
160 170 180 190 200
GGNQQYQPAH NVDPVIKNNR YFWHEARGVE NWNDRWQVTQ WGIGLPDLNT
210 220 230 240 250
SNQELQDIII GFLNDAISLG ADGFRFDAAK HIELPNDPGG SNFWPRVLGS
260 270 280 290 300
LNNKDKLFNY GEVLQGGADN FAGYANYLSL SASSYGDSVR SAVGYHGGIN
310 320 330 340 350
VDAAKFFNAN NVSPSKLVTW VESHDTYAND NSESTGLNDW QIKMGWAIIA
360 370 380 390 400
SRAETTSLFF NRPAGSGKFA NRLGDAGNTL WKDPDIVAVN KFHNAMVGQD
410 420 430 440 450
EYLRTQGNQI MQVERGTKGM TIVNLGGNAQ INSPTRLEEG VYQNKASGGG
460 470 480 490 500
SFTVSNGRIT GHLDGGKIAV LYNVAQQTPT VSVDPGEGPF YTDSVNVRIN
510 520 530 540 550
YSNANSATYT LNGGPAIPFK SGDMVSIGAG TPIGSTFVLK IVAANLSGQT
560 570 580 590 600
EKTFRYTKEE PSSGITVHFY KPSGWGAPNI YYYDDSVTPL REGSAWPGVA
610 620 630 640 650
MQDEGNGWYV YRAPGWTQAK IIFNSNGNQV PGSQMPGYAV SGEKWIKEGQ
660 670 680 690
FTSQNPQETK PTVTIDKPEG AFHGDSLEIT LNTAMPTVVL TD
Length:692
Mass (Da):75,464
Last modified:January 25, 2012 - v1
Checksum:i8B93F0345A0F6312
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003107 Genomic DNA. Translation: AET60999.1.
RefSeqiWP_014281696.1. NC_016641.1.
YP_005077222.1. NC_016641.1.

Genome annotation databases

EnsemblBacteriaiAET60999; AET60999; HPL003_21345.
GeneIDi11583737.
KEGGipta:HPL003_21345.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003107 Genomic DNA. Translation: AET60999.1.
RefSeqiWP_014281696.1. NC_016641.1.
YP_005077222.1. NC_016641.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAET60999; AET60999; HPL003_21345.
GeneIDi11583737.
KEGGipta:HPL003_21345.

Phylogenomic databases

KOiK01176.
OMAiAYANYMN.

Enzyme and pathway databases

BioCyciPTER985665:GHT3-4321-MONOMER.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Complete sequence of Paenibacillus terrae HPL-003."
    Shin S.H., Kim S., Kim J.Y.
    Submitted (NOV-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: HPL-003Imported.
  2. Shin S.H., Kim S., Kim J.Y.
    Submitted (NOV-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: HPL-003.

Entry informationi

Entry nameiG7VPK1_PAETH
AccessioniPrimary (citable) accession number: G7VPK1
Entry historyi
Integrated into UniProtKB/TrEMBL: January 25, 2012
Last sequence update: January 25, 2012
Last modified: February 4, 2015
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.