G7V627 (G7V627_THELD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alanine racemase EMBL AER67014.1
EC=5.1.1.1 EMBL AER67014.1

Gene names

Ordered Locus Names:

Tlie_1283 EMBL AER67014.1

Organism

Thermovirga lienii (strain ATCC BAA-1197 / DSM 17291 / Cas60314) [Complete proteome] [HAMAP]

Taxonomic identifier

580340 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Synergistetes › Synergistia › Synergistales › Synergistaceae › Thermovirga › Thermovirga lienii

Protein attributes

Sequence length	371 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. SAAS SAAS011079
Sequence similarities	Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
Ligand	Pyridoxal phosphate SAAS SAAS011079
Molecular function	Isomerase SAAS SAAS011079 EMBL AER67014.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	alanine metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	alanine racemase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	G7V627 [UniParc]. Last modified January 25, 2012. Version 1. Checksum: 5CC1D8BC2D29F8E8	FASTA	371	41,290
	10 20 30 40 50 60 MNFRPTRMEV NLENIKHNFL QVKGLLKEKS QIIGVVKANG YGMGMVQVAK TLIEAGCSRL 70 80 90 100 110 120 AVATPDEAII LRENGIYLPL LVLGPSPASV AEEYVNKDIS STITDLSFAD ALSKAAIDLG 130 140 150 160 170 180 KRARVHIKVD TGMGRIGFLP EEVPEVVERL LLMKGLEIEG IFTHFATADE RNGSYTETQF 190 200 210 220 230 240 KRFCDVLDVL RTKNVHFRLR HCCNSAGTLN FSHMHMDAVR PGIILYGMWP SEWCKKKIKL 250 260 270 280 290 300 KRAFKVVTAV ACVRTLPQGS GISYGLRYMT RGEERIAVLP IGYHDGYPRS LSMKTEVLIK 310 320 330 340 350 360 GQRAPIVGNI CMDQTMVDVT HIPDVKVGDE VVLVGPQGNE EITPEEIAKH LGTINYEIPN 370 LFTPRVPRVY V

References

[1]

"The complete genome of chromosome of Thermovirga lienii DSM 17291." US DOE Joint Genome Institute (JGI-PGF) Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Peters L., Mikhailova N., Saunders E., Kyrpides N., Mavromatis K., Ivanova N., Last F.I., Brettin T., Detter J.C. , Han C., Larimer F., Land M., Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Spring S., Schroeder M., Brambilla E.-M., Klenk H.-P., Eisen J.A. Submitted (OCT-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC BAA-1197 / DSM 17291 / Cas60314.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP003096 Genomic DNA. Translation: AER67014.1.
RefSeq	YP_004933111.1. NC_016148.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AER67014; AER67014; Tlie_1283.
GeneID	11377750.
KEGG	tli:Tlie_1283.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K01775.
Family and domain databases
Gene3D	2.40.37.10. 1 hit.
HAMAP	MF_01201. Ala_racemase.
InterPro	IPR000821. Ala_racemase. IPR009006. Ala_racemase/Decarboxylase_C. IPR011079. Ala_racemase_C. IPR001608. Ala_racemase_N. [Graphical view]
Pfam	PF00842. Ala_racemase_C. 1 hit. PF01168. Ala_racemase_N. 1 hit. [Graphical view]
PRINTS	PR00992. ALARACEMASE.
SMART	SM01005. Ala_racemase_C. 1 hit. [Graphical view]
SUPFAM	SSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMs	TIGR00492. alr. 1 hit.
ProtoNet	Search...

Entry information

Entry name

G7V627_THELD

Accession

Primary (citable) accession number: G7V627

Entry history

Integrated into UniProtKB/TrEMBL:	January 25, 2012
Last sequence update:	January 25, 2012
Last modified:	April 3, 2013
This is version 13 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)