Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

G7UW13

- G7UW13_PSEUP

UniProt

G7UW13 - G7UW13_PSEUP

Protein
Submitted name:

DNA ligase

Gene

DSC_15135

Organism
Pseudoxanthomonas spadix (strain BD-a59)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 16 (01 Oct 2014)
      Sequence version 1 (25 Jan 2012)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciPSPA1045855:GH5V-2867-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA ligaseImported
    Gene namesi
    Ordered Locus Names:DSC_15135Imported
    OrganismiPseudoxanthomonas spadix (strain BD-a59)Imported
    Taxonomic identifieri1045855 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaePseudoxanthomonas
    ProteomesiUP000005870: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliG7UW13.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012310. DNA_ligase_ATP-dep_cent.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    G7UW13-1 [UniParc]FASTAAdd to Basket

    « Hide

    MRVMLLSLLL SLLLNCLLLG VPAHAEPPRL MLATGYHGHL ALADYLVSEK    50
    LDGVRGRWDG QALWTRGGAR IDAPAWFTRG WPTQPLDGEL WLGRGRFDAA 100
    SALVRAGNAD DPAWHDLHFM LFDLPADAGP FEARVARMQA LVKASGNAQL 150
    RLVEQRRIDN VAALDAQFAR VVAAGGEGLM LHRRDAHYLV GRSDALLKYK 200
    PYDDAEARVV AHLGGKGKYA GLLGALLVQL PDGRSFRIGS GFTDAQRAAP 250
    PPLGAWVTYR YNGLTSKGLP RFARFLHVRD EPPPPDPQR 289
    Length:289
    Mass (Da):31,659
    Last modified:January 25, 2012 - v1
    Checksum:i713C7CD6AA4657DA
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003093 Genomic DNA. Translation: AER57671.1.
    RefSeqiWP_014161844.1. NC_016147.2.
    YP_004931712.1. NC_016147.2.

    Genome annotation databases

    EnsemblBacteriaiAER57671; AER57671; DSC_15135.
    GeneIDi11373728.
    KEGGipsd:DSC_15135.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003093 Genomic DNA. Translation: AER57671.1 .
    RefSeqi WP_014161844.1. NC_016147.2.
    YP_004931712.1. NC_016147.2.

    3D structure databases

    ProteinModelPortali G7UW13.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AER57671 ; AER57671 ; DSC_15135 .
    GeneIDi 11373728.
    KEGGi psd:DSC_15135.

    Phylogenomic databases

    KOi K01971.

    Enzyme and pathway databases

    BioCyci PSPA1045855:GH5V-2867-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012310. DNA_ligase_ATP-dep_cent.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete Genome Sequence of the BTEX-Degrading Bacterium Pseudoxanthomonas spadix BD-a59."
      Lee S.H., Jin H.M., Lee H.J., Kim J.M., Jeon C.O.
      J. Bacteriol. 194:544-544(2012) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: BD-a59Imported.

    Entry informationi

    Entry nameiG7UW13_PSEUP
    AccessioniPrimary (citable) accession number: G7UW13
    Entry historyi
    Integrated into UniProtKB/TrEMBL: January 25, 2012
    Last sequence update: January 25, 2012
    Last modified: October 1, 2014
    This is version 16 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3