Skip Header

Contribute Send feedback
Read comments (?) or add your own

G7UW13 (G7UW13_PSEUP) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 10. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesSubmitted name:
DNA ligase EMBL AER57671.1
Gene names
Ordered Locus Names:DSC_15135 EMBL AER57671.1
OrganismPseudoxanthomonas spadix (strain BD-a59) [Complete proteome] [HAMAP]
Taxonomic identifier1045855 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Xanthomonadales › Xanthomonadaceae › Pseudoxanthomonas ›

Protein attributes

Sequence length289 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL AER57671.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
G7UW13 [UniParc].

Last modified January 25, 2012. Version 1.
Checksum: 713C7CD6AA4657DA

FASTA28931,659
        10         20         30         40         50         60 
MRVMLLSLLL SLLLNCLLLG VPAHAEPPRL MLATGYHGHL ALADYLVSEK LDGVRGRWDG 

        70         80         90        100        110        120 
QALWTRGGAR IDAPAWFTRG WPTQPLDGEL WLGRGRFDAA SALVRAGNAD DPAWHDLHFM 

       130        140        150        160        170        180 
LFDLPADAGP FEARVARMQA LVKASGNAQL RLVEQRRIDN VAALDAQFAR VVAAGGEGLM 

       190        200        210        220        230        240 
LHRRDAHYLV GRSDALLKYK PYDDAEARVV AHLGGKGKYA GLLGALLVQL PDGRSFRIGS 

       250        260        270        280 
GFTDAQRAAP PPLGAWVTYR YNGLTSKGLP RFARFLHVRD EPPPPDPQR

« Hide

References

[1]"Complete Genome Sequence of the BTEX-Degrading Bacterium Pseudoxanthomonas spadix BD-a59."
Lee S.H., Jin H.M., Lee H.J., Kim J.M., Jeon C.O.
J. Bacteriol. 194:544-544(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: BD-a59 EMBL AER57671.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP003093 Genomic DNA. Translation: AER57671.1.
RefSeqYP_004931712.1. NC_016147.2.

3D structure databases

ProteinModelPortalG7UW13.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAER57671; AER57671; DSC_15135.
GeneID11373728.
KEGGpsd:DSC_15135.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.

Enzyme and pathway databases

BioCycPSPA1045855:GH5V-2867-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. Nucleic_acid_OB. 1 hit.
ProtoNetSearch...

Entry information

Entry nameG7UW13_PSEUP
AccessionPrimary (citable) accession number: G7UW13
Entry history
Integrated into UniProtKB/TrEMBL: January 25, 2012
Last sequence update: January 25, 2012
Last modified: April 3, 2013
This is version 10 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry info