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Protein

Superoxide dismutase [Cu-Zn]

Gene

DSC_02075

Organism
Pseudoxanthomonas spadix (strain BD-a59)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Destroys radicals which are normally produced within the cells and which are toxic to biological systems.UniRule annotation

Catalytic activityi

2 superoxide + 2 H+ = O2 + H2O2.UniRule annotation

Cofactori

Protein has several cofactor binding sites:
  • Cu cationUniRule annotationNote: Binds 1 copper ion per subunit.UniRule annotation
  • Zn2+UniRule annotationNote: Binds 1 zinc ion per subunit.UniRule annotation

GO - Molecular functioni

  1. metal ion binding Source: UniProtKB-KW
  2. superoxide dismutase activity Source: UniProtKB-EC
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotation

Keywords - Ligandi

CopperUniRule annotation, Metal-bindingUniRule annotation, ZincUniRule annotation

Enzyme and pathway databases

BioCyciPSPA1045855:GH5V-218-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Superoxide dismutase [Cu-Zn]UniRule annotation (EC:1.15.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:DSC_02075Imported
OrganismiPseudoxanthomonas spadix (strain BD-a59)Imported
Taxonomic identifieri1045855 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaXanthomonadalesXanthomonadaceaePseudoxanthomonas
ProteomesiUP000005870: Chromosome

Family & Domainsi

Sequence similaritiesi

Belongs to the Cu-Zn superoxide dismutase family.UniRule annotation

Phylogenomic databases

KOiK04565.

Family and domain databases

Gene3Di2.60.40.200. 1 hit.
InterProiIPR018152. SOD_Cu/Zn_BS.
IPR001424. SOD_Cu_Zn_dom.
IPR006311. TAT_signal.
[Graphical view]
PfamiPF00080. Sod_Cu. 1 hit.
[Graphical view]
PRINTSiPR00068. CUZNDISMTASE.
SUPFAMiSSF49329. SSF49329. 1 hit.
PROSITEiPS00087. SOD_CU_ZN_1. 1 hit.
PS51318. TAT. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

G7UUY9-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSPPCPRRRL LRVPTLAGAL ALAACSSAPK PLPPAPPPAT ATPMAQGAQA
60 70 80 90 100
IMQSASASLV SGKLELTPAA AGVRIAGTIG GLPALGRFGF HVHETGDCSA
110 120 130 140 150
VDGSSAGGHF NPTHQPHGNA KIGAHHAGDM DNLVADAEGI AHVDTQLAGV
160 170 180 190
TLGGGAMDIL GRALVVHADP DDYATQPAGK SGARVACGVI KAIR
Length:194
Mass (Da):19,229
Last modified:January 25, 2012 - v1
Checksum:iA4892D257D794FA8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003093 Genomic DNA. Translation: AER55068.1.
RefSeqiWP_014159246.1. NC_016147.2.
YP_004929109.1. NC_016147.2.

Genome annotation databases

EnsemblBacteriaiAER55068; AER55068; DSC_02075.
GeneIDi11374823.
KEGGipsd:DSC_02075.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003093 Genomic DNA. Translation: AER55068.1.
RefSeqiWP_014159246.1. NC_016147.2.
YP_004929109.1. NC_016147.2.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAER55068; AER55068; DSC_02075.
GeneIDi11374823.
KEGGipsd:DSC_02075.

Phylogenomic databases

KOiK04565.

Enzyme and pathway databases

BioCyciPSPA1045855:GH5V-218-MONOMER.

Family and domain databases

Gene3Di2.60.40.200. 1 hit.
InterProiIPR018152. SOD_Cu/Zn_BS.
IPR001424. SOD_Cu_Zn_dom.
IPR006311. TAT_signal.
[Graphical view]
PfamiPF00080. Sod_Cu. 1 hit.
[Graphical view]
PRINTSiPR00068. CUZNDISMTASE.
SUPFAMiSSF49329. SSF49329. 1 hit.
PROSITEiPS00087. SOD_CU_ZN_1. 1 hit.
PS51318. TAT. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete Genome Sequence of the BTEX-Degrading Bacterium Pseudoxanthomonas spadix BD-a59."
    Lee S.H., Jin H.M., Lee H.J., Kim J.M., Jeon C.O.
    J. Bacteriol. 194:544-544(2012) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: BD-a59Imported.

Entry informationi

Entry nameiG7UUY9_PSEUP
AccessioniPrimary (citable) accession number: G7UUY9
Entry historyi
Integrated into UniProtKB/TrEMBL: January 25, 2012
Last sequence update: January 25, 2012
Last modified: February 4, 2015
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.