G7UEQ5 (G7UEQ5_PANAN) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Exodeoxyribonuclease 7 small subunit HAMAP-Rule MF_00337
EC=3.1.11.6 HAMAP-Rule MF_00337

Alternative name(s):
Exodeoxyribonuclease VII small subunit HAMAP-Rule MF_00337

Gene names

Name:	xseB HAMAP-Rule MF_00337
ORF Names:	PAGR_g3228 EMBL AER33720.1

Organism

Pantoea ananatis PA13 EMBL AER33720.1

Taxonomic identifier

1095774 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Pantoea › Pantoea ananas

Protein attributes

Sequence length	80 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides By similarity. SAAS SAAS003761 HAMAP-Rule MF_00337
Catalytic activity	Exonucleolytic cleavage in either 5'- to 3'- or 3'- to 5'-direction to yield nucleoside 5'-phosphates. HAMAP-Rule MF_00337 Exonucleolytic cleavage in either 5'- to 3'-or 3'- to 5'-direction to yield nucleoside 5'-phosphates. SAAS SAAS003761
Subunit structure	Heterooligomer composed of large and small subunits By similarity. SAAS SAAS003761 HAMAP-Rule MF_00337
Subcellular location	Cytoplasm By similarity SAAS SAAS003761 HAMAP-Rule MF_00337.
Sequence similarities	Belongs to the XseB family. HAMAP-Rule MF_00337

Ontologies

Keywords
Cellular component	Cytoplasm SAAS SAAS003761 HAMAP-Rule MF_00337
Molecular function	Exonuclease SAAS SAAS003761 HAMAP-Rule MF_00337 Hydrolase Nuclease
Gene Ontology (GO)
Biological_process	DNA catabolic process Inferred from electronic annotation. Source: HAMAP nucleic acid phosphodiester bond hydrolysis Inferred from electronic annotation. Source: GOC
Cellular_component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell exodeoxyribonuclease VII complex Inferred from electronic annotation. Source: InterPro
Molecular_function	exodeoxyribonuclease VII activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	G7UEQ5 [UniParc]. Last modified January 25, 2012. Version 1. Checksum: CA8AAFC65161B949	FASTA	80	9,042
	10 20 30 40 50 60 MPKKAEQPAS FETSLQQLEQ IVSRLESGEL PLEEALNEFE RGVQLARNGQ QTLQQAEQRV 70 80 RILLSDDKDA DLSSFTPENN

References

[1]	"Complete Genome Sequence of the Rice Pathogen Pantoea ananatis Strain PA13." Choi O., Lim J.Y., Seo Y.S., Hwang I., Kim J. J. Bacteriol. 194:531-531(2012) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: PA13 EMBL AER33720.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP003085 Genomic DNA. Translation: AER33720.1.
RefSeq	YP_005993940.1. NC_017554.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AER33720; AER33720; PAGR_g3228.
GeneID	12586521.
KEGG	paq:PAGR_g3228.
Phylogenomic databases
KO	K03602.
Enzyme and pathway databases
BioCyc	PANA1095774:GLIA-3300-MONOMER.
Family and domain databases
Gene3D	1.10.287.1040. 1 hit.
HAMAP	MF_00337. Exonuc_7_S.
InterPro	IPR003761. Exonuc_VII_S. [Graphical view]
Pfam	PF02609. Exonuc_VII_S. 1 hit. [Graphical view]
PIRSF	PIRSF006488. Exonuc_VII_S. 1 hit.
ProDom	PD028235. Exonuc_VII_S. 1 hit. [Graphical view] [Entries sharing at least one domain]
SUPFAM	SSF116842. SSF116842. 1 hit.
TIGRFAMs	TIGR01280. xseB. 1 hit.
ProtoNet	Search...

Entry information

Entry name

G7UEQ5_PANAN

Accession

Primary (citable) accession number: G7UEQ5

Entry history

Integrated into UniProtKB/TrEMBL:	January 25, 2012
Last sequence update:	January 25, 2012
Last modified:	May 29, 2013
This is version 9 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)