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G7TXT7 (G7TXT7_VIBCL) Unreviewed, UniProtKB/TrEMBL

Last modified March 19, 2014. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=3.2.1.1 EMBL AET28967.1
Gene names
Name:malS EMBL AET28967.1
ORF Names:Vch1786_II0549 EMBL AET28967.1
OrganismVibrio cholerae O1 str. 2010EL-1786 [Complete proteome] EMBL AET28967.1
Taxonomic identifier914149 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio

Protein attributes

Sequence length690 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
G7TXT7 [UniParc].

Last modified January 25, 2012. Version 1.
Checksum: 7C82C00C928FDF41

FASTA69077,332
        10         20         30         40         50         60 
MKLNALTLSL LSALALPALA SPASTANLTV ATTTNSRDFP LQADEPLVIP LTKGDYTLTI 

        70         80         90        100        110        120 
SGIGGDCPPV PEQEIKFNTP IALNCHVPTQ LPLSIRFTGD YAFQWQAQNN TLTFVRQTTK 

       130        140        150        160        170        180 
AAKTEFHRPI PNVSCEVYQG GEVTLDLASS FADGTELQDA MTGQVVTIEQ GKVRLTPSAN 

       190        200        210        220        230        240 
SGGLVLLEPK QTAKAEPKQP FTYRNANIYF VMVDRFYNAD PSNDGSYGRH KDGQEEIGTF 

       250        260        270        280        290        300 
HGGDLKGVIA KLDHIQSLGT DAIWLSPIVE QVHGFVGGGE KGSFPFYAYH GYWTRDFTKI 

       310        320        330        340        350        360 
DANFGKDEDL QTLVREAHRR GIKILMDAVI NHAGYATLAD LQQDAVQVVN APMLPERWND 

       370        380        390        400        410        420 
WKPSADENWH SFHQAIDYQS KNWQQWWGPD WVRAGLPGYP APGSSDITMN LAGLPDFRTE 

       430        440        450        460        470        480 
SPQAVTPPQW LLNNPGTRVV SKPNYTVADY LIEWQSDWVR RFGIDGFRID TVKHVEGEVW 

       490        500        510        520        530        540 
QRLKQRATES LAAWRKDNNQ SGEPFWMMGE VWGHGAYRSP YFDDGFDALI NFDIQKRMDN 

       550        560        570        580        590        600 
GAACLSQMAM VYRDYAQTLA KYPDFNPVSY MSSHDTELFF GRFKSLDMQR NAANALLLTP 

       610        620        630        640        650        660 
GAIQVYYGDE VAREAGPYAD DFHQGTRSDM PWEWNAERQA LLKHWQTLGQ FRQRHPAIGT 

       670        680        690 
GEHREIAQSN AYVFTRTLGE DKVVVAFVGR 

« Hide

References

[1]Balajee S.A., Besser J., Fields P., Frace A.M., Freeman M., Govil D., Humphrys M., Neuhaus E., Olsen-Rasmussen M., Ribot E., Rowe L., Sammons S., Seenu S., Talkington D., Tang K., Tarr C., Gerner-Smidt P.
Submitted (NOV-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 2010EL-1786 EMBL AET28967.1.
[2]"Comparative Genomics of Vibrio cholerae from Haiti, Asia, and Africa."
V. cholerae Outbreak Genomics Task Force
Reimer A.R., Van Domselaar G., Stroika S., Walker M., Kent H., Tarr C., Talkington D., Rowe L., Olsen-Rasmussen M., Frace M., Sammons S., Dahourou G.A., Boncy J., Smith A.M., Mabon P., Petkau A., Graham M., Gilmour M.W., Gerner-Smidt P.
Submitted (OCT-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 2010EL-1786 EMBL AET28967.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003070 Genomic DNA. Translation: AET28967.1.
RefSeqYP_004939521.1. NC_016446.1.

3D structure databases

ProteinModelPortalG7TXT7.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAET28967; AET28967; Vch1786_II0549.
GeneID11463583.
KEGGvce:Vch1786_II0549.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01176.

Enzyme and pathway databases

BioCycVCHO914149:GHG2-3451-MONOMER.

Family and domain databases

Gene3D3.20.20.80. 1 hit.
InterProIPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFPIRSF036917. Alph_amls_MalS. 1 hit.
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameG7TXT7_VIBCL
AccessionPrimary (citable) accession number: G7TXT7
Entry history
Integrated into UniProtKB/TrEMBL: January 25, 2012
Last sequence update: January 25, 2012
Last modified: March 19, 2014
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)