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G7TXT7

- G7TXT7_VIBCL

UniProt

G7TXT7 - G7TXT7_VIBCL

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Protein
Submitted name:

Periplasmic alpha-amylase

Gene

malS

Organism
Vibrio cholerae O1 str. 2010EL-1786
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. alpha-amylase activity Source: UniProtKB-EC
  2. calcium ion binding Source: InterPro

GO - Biological processi

  1. alpha-glucan catabolic process Source: InterPro
  2. cellular oligosaccharide catabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseImported, Hydrolase

Enzyme and pathway databases

BioCyciVCHO914149:GHG2-3451-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Periplasmic alpha-amylaseImported (EC:3.2.1.1Imported)
Gene namesi
Name:malSImported
ORF Names:Vch1786_II0549Imported
OrganismiVibrio cholerae O1 str. 2010EL-1786Imported
Taxonomic identifieri914149 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
ProteomesiUP000006802: Chromosome 2

Subcellular locationi

GO - Cellular componenti

  1. periplasmic space Source: InterPro
Complete GO annotation...

Structurei

3D structure databases

ProteinModelPortaliG7TXT7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK01176.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF036917. Alph_amls_MalS. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

G7TXT7-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MKLNALTLSL LSALALPALA SPASTANLTV ATTTNSRDFP LQADEPLVIP
60 70 80 90 100
LTKGDYTLTI SGIGGDCPPV PEQEIKFNTP IALNCHVPTQ LPLSIRFTGD
110 120 130 140 150
YAFQWQAQNN TLTFVRQTTK AAKTEFHRPI PNVSCEVYQG GEVTLDLASS
160 170 180 190 200
FADGTELQDA MTGQVVTIEQ GKVRLTPSAN SGGLVLLEPK QTAKAEPKQP
210 220 230 240 250
FTYRNANIYF VMVDRFYNAD PSNDGSYGRH KDGQEEIGTF HGGDLKGVIA
260 270 280 290 300
KLDHIQSLGT DAIWLSPIVE QVHGFVGGGE KGSFPFYAYH GYWTRDFTKI
310 320 330 340 350
DANFGKDEDL QTLVREAHRR GIKILMDAVI NHAGYATLAD LQQDAVQVVN
360 370 380 390 400
APMLPERWND WKPSADENWH SFHQAIDYQS KNWQQWWGPD WVRAGLPGYP
410 420 430 440 450
APGSSDITMN LAGLPDFRTE SPQAVTPPQW LLNNPGTRVV SKPNYTVADY
460 470 480 490 500
LIEWQSDWVR RFGIDGFRID TVKHVEGEVW QRLKQRATES LAAWRKDNNQ
510 520 530 540 550
SGEPFWMMGE VWGHGAYRSP YFDDGFDALI NFDIQKRMDN GAACLSQMAM
560 570 580 590 600
VYRDYAQTLA KYPDFNPVSY MSSHDTELFF GRFKSLDMQR NAANALLLTP
610 620 630 640 650
GAIQVYYGDE VAREAGPYAD DFHQGTRSDM PWEWNAERQA LLKHWQTLGQ
660 670 680 690
FRQRHPAIGT GEHREIAQSN AYVFTRTLGE DKVVVAFVGR
Length:690
Mass (Da):77,332
Last modified:January 25, 2012 - v1
Checksum:i7C82C00C928FDF41
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003070 Genomic DNA. Translation: AET28967.1.
RefSeqiYP_004939521.1. NC_016446.1.

Genome annotation databases

EnsemblBacteriaiAET28967; AET28967; Vch1786_II0549.
GeneIDi11463583.
KEGGivce:Vch1786_II0549.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003070 Genomic DNA. Translation: AET28967.1 .
RefSeqi YP_004939521.1. NC_016446.1.

3D structure databases

ProteinModelPortali G7TXT7.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AET28967 ; AET28967 ; Vch1786_II0549 .
GeneIDi 11463583.
KEGGi vce:Vch1786_II0549.

Phylogenomic databases

KOi K01176.

Enzyme and pathway databases

BioCyci VCHO914149:GHG2-3451-MONOMER.

Family and domain databases

Gene3Di 3.20.20.80. 1 hit.
InterProi IPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
[Graphical view ]
PIRSFi PIRSF036917. Alph_amls_MalS. 1 hit.
SMARTi SM00642. Aamy. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: 2010EL-1786Imported.
  2. "Comparative Genomics of Vibrio cholerae from Haiti, Asia, and Africa."
    V. cholerae Outbreak Genomics Task Force
    Reimer A.R., Van Domselaar G., Stroika S., Walker M., Kent H., Tarr C., Talkington D., Rowe L., Olsen-Rasmussen M., Frace M., Sammons S., Dahourou G.A., Boncy J., Smith A.M., Mabon P., Petkau A., Graham M., Gilmour M.W., Gerner-Smidt P.
    Submitted (OCT-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: 2010EL-1786Imported.

Entry informationi

Entry nameiG7TXT7_VIBCL
AccessioniPrimary (citable) accession number: G7TXT7
Entry historyi
Integrated into UniProtKB/TrEMBL: January 25, 2012
Last sequence update: January 25, 2012
Last modified: October 1, 2014
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3