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G7TXT7

- G7TXT7_VIBCL

UniProt

G7TXT7 - G7TXT7_VIBCL

Protein
Submitted name:

Periplasmic alpha-amylase

Gene

malS

Organism
Vibrio cholerae O1 str. 2010EL-1786
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 17 (01 Oct 2014)
      Sequence version 1 (25 Jan 2012)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. alpha-amylase activity Source: UniProtKB-EC
    2. calcium ion binding Source: InterPro

    GO - Biological processi

    1. alpha-glucan catabolic process Source: InterPro
    2. cellular oligosaccharide catabolic process Source: InterPro

    Keywords - Molecular functioni

    GlycosidaseImported, Hydrolase

    Enzyme and pathway databases

    BioCyciVCHO914149:GHG2-3451-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Periplasmic alpha-amylaseImported (EC:3.2.1.1Imported)
    Gene namesi
    Name:malSImported
    ORF Names:Vch1786_II0549Imported
    OrganismiVibrio cholerae O1 str. 2010EL-1786Imported
    Taxonomic identifieri914149 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
    ProteomesiUP000006802: Chromosome 2

    Subcellular locationi

    GO - Cellular componenti

    1. periplasmic space Source: InterPro

    Structurei

    3D structure databases

    ProteinModelPortaliG7TXT7.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK01176.

    Family and domain databases

    Gene3Di3.20.20.80. 1 hit.
    InterProiIPR014635. A_amylase_MalS.
    IPR015902. Glyco_hydro_13.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    [Graphical view]
    PIRSFiPIRSF036917. Alph_amls_MalS. 1 hit.
    SMARTiSM00642. Aamy. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    G7TXT7-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKLNALTLSL LSALALPALA SPASTANLTV ATTTNSRDFP LQADEPLVIP    50
    LTKGDYTLTI SGIGGDCPPV PEQEIKFNTP IALNCHVPTQ LPLSIRFTGD 100
    YAFQWQAQNN TLTFVRQTTK AAKTEFHRPI PNVSCEVYQG GEVTLDLASS 150
    FADGTELQDA MTGQVVTIEQ GKVRLTPSAN SGGLVLLEPK QTAKAEPKQP 200
    FTYRNANIYF VMVDRFYNAD PSNDGSYGRH KDGQEEIGTF HGGDLKGVIA 250
    KLDHIQSLGT DAIWLSPIVE QVHGFVGGGE KGSFPFYAYH GYWTRDFTKI 300
    DANFGKDEDL QTLVREAHRR GIKILMDAVI NHAGYATLAD LQQDAVQVVN 350
    APMLPERWND WKPSADENWH SFHQAIDYQS KNWQQWWGPD WVRAGLPGYP 400
    APGSSDITMN LAGLPDFRTE SPQAVTPPQW LLNNPGTRVV SKPNYTVADY 450
    LIEWQSDWVR RFGIDGFRID TVKHVEGEVW QRLKQRATES LAAWRKDNNQ 500
    SGEPFWMMGE VWGHGAYRSP YFDDGFDALI NFDIQKRMDN GAACLSQMAM 550
    VYRDYAQTLA KYPDFNPVSY MSSHDTELFF GRFKSLDMQR NAANALLLTP 600
    GAIQVYYGDE VAREAGPYAD DFHQGTRSDM PWEWNAERQA LLKHWQTLGQ 650
    FRQRHPAIGT GEHREIAQSN AYVFTRTLGE DKVVVAFVGR 690
    Length:690
    Mass (Da):77,332
    Last modified:January 25, 2012 - v1
    Checksum:i7C82C00C928FDF41
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003070 Genomic DNA. Translation: AET28967.1.
    RefSeqiYP_004939521.1. NC_016446.1.

    Genome annotation databases

    EnsemblBacteriaiAET28967; AET28967; Vch1786_II0549.
    GeneIDi11463583.
    KEGGivce:Vch1786_II0549.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003070 Genomic DNA. Translation: AET28967.1 .
    RefSeqi YP_004939521.1. NC_016446.1.

    3D structure databases

    ProteinModelPortali G7TXT7.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AET28967 ; AET28967 ; Vch1786_II0549 .
    GeneIDi 11463583.
    KEGGi vce:Vch1786_II0549.

    Phylogenomic databases

    KOi K01176.

    Enzyme and pathway databases

    BioCyci VCHO914149:GHG2-3451-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.80. 1 hit.
    InterProi IPR014635. A_amylase_MalS.
    IPR015902. Glyco_hydro_13.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF036917. Alph_amls_MalS. 1 hit.
    SMARTi SM00642. Aamy. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: 2010EL-1786Imported.
    2. "Comparative Genomics of Vibrio cholerae from Haiti, Asia, and Africa."
      V. cholerae Outbreak Genomics Task Force
      Reimer A.R., Van Domselaar G., Stroika S., Walker M., Kent H., Tarr C., Talkington D., Rowe L., Olsen-Rasmussen M., Frace M., Sammons S., Dahourou G.A., Boncy J., Smith A.M., Mabon P., Petkau A., Graham M., Gilmour M.W., Gerner-Smidt P.
      Submitted (OCT-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: 2010EL-1786Imported.

    Entry informationi

    Entry nameiG7TXT7_VIBCL
    AccessioniPrimary (citable) accession number: G7TXT7
    Entry historyi
    Integrated into UniProtKB/TrEMBL: January 25, 2012
    Last sequence update: January 25, 2012
    Last modified: October 1, 2014
    This is version 17 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3