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G7TW89

- G7TW89_VIBCL

UniProt

G7TW89 - G7TW89_VIBCL

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Protein
Alpha-amylase
Gene
Vch1786_II1041
Organism
Vibrio cholerae O1 str. 2010EL-1786
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

GO - Molecular functioni

  1. cation binding Source: InterPro
  2. hydrolase activity, acting on glycosyl bonds Source: UniProtKB-KW

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotationImported, Hydrolase

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Enzyme and pathway databases

BioCyciVCHO914149:GHG2-3943-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
Gene namesi
ORF Names:Vch1786_II1041Imported
OrganismiVibrio cholerae O1 str. 2010EL-1786Imported
Taxonomic identifieri914149 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
ProteomesiUP000006802: Chromosome 2

Structurei

3D structure databases

ProteinModelPortaliG7TW89.

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Phylogenomic databases

KOiK01176.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

G7TW89-1 [UniParc]FASTAAdd to Basket

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MKSSYVVLCA TFAAASFTSS VQAEAILHAF NWKYADVTAN AAQIAAAGYK    50
KVLISPALKS SGNEWWARYQ PQDLRVIDSP LGNKTDLQTL IKTLQDYGVE 100
VYSDVVFNHM ANESWKRSDL NYPGSEVLAS YTNQAYYYQQ QKLFGDLSHN 150
LFSQNDFHPE GCITDWGNPG HVQYWRLCGG AGDRGLPDLD ANAWVINQQR 200
AYLQALKQMG IRGFRIDAVK HMSQYHIDQV FTPEIISGMH VFGEVITSGG 250
QGDGSYDAFL APYLNNTTHA AYDFPLFASI RAAFSYQGSM SQLHDPQAYG 300
QALPNARAIT FAITHDIPTN DGFRYQILNP QDEQLAYAYL LGKDGGTPLI 350
YSDDLADHED KDNGRWANVW NQPSMQHMLR FHNAMQGKPM TVMYSDSCLM 400
LFKRGKEGVV GINKCGESKN VTIDTYQHEF NWYQTYQDTL SDDRFSVSSR 450
YHTLTIPARV ARMWML 466
Length:466
Mass (Da):52,573
Last modified:January 25, 2012 - v1
Checksum:i7CABB77330C05D3F
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003070 Genomic DNA. Translation: AET29459.1.
RefSeqiYP_004940013.1. NC_016446.1.

Genome annotation databases

EnsemblBacteriaiAET29459; AET29459; Vch1786_II1041.
GeneIDi11464075.
KEGGivce:Vch1786_II1041.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003070 Genomic DNA. Translation: AET29459.1 .
RefSeqi YP_004940013.1. NC_016446.1.

3D structure databases

ProteinModelPortali G7TW89.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AET29459 ; AET29459 ; Vch1786_II1041 .
GeneIDi 11464075.
KEGGi vce:Vch1786_II1041.

Phylogenomic databases

KOi K01176.

Enzyme and pathway databases

BioCyci VCHO914149:GHG2-3943-MONOMER.

Family and domain databases

Gene3Di 3.20.20.80. 1 hit.
InterProi IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
[Graphical view ]
PRINTSi PR00110. ALPHAAMYLASE.
SUPFAMi SSF51445. SSF51445. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: 2010EL-1786Imported.
  2. "Comparative Genomics of Vibrio cholerae from Haiti, Asia, and Africa."
    V. cholerae Outbreak Genomics Task Force
    Reimer A.R., Van Domselaar G., Stroika S., Walker M., Kent H., Tarr C., Talkington D., Rowe L., Olsen-Rasmussen M., Frace M., Sammons S., Dahourou G.A., Boncy J., Smith A.M., Mabon P., Petkau A., Graham M., Gilmour M.W., Gerner-Smidt P.
    Submitted (OCT-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: 2010EL-1786Imported.

Entry informationi

Entry nameiG7TW89_VIBCL
AccessioniPrimary (citable) accession number: G7TW89
Entry historyi
Integrated into UniProtKB/TrEMBL: January 25, 2012
Last sequence update: January 25, 2012
Last modified: July 9, 2014
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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