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G7TW89 (G7TW89_VIBCL) Unreviewed, UniProtKB/TrEMBL

Last modified March 19, 2014. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:Vch1786_II1041 EMBL AET29459.1
OrganismVibrio cholerae O1 str. 2010EL-1786 [Complete proteome] EMBL AET29459.1
Taxonomic identifier914149 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio

Protein attributes

Sequence length466 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615

Ontologies

Sequences

Sequence LengthMass (Da)Tools
G7TW89 [UniParc].

Last modified January 25, 2012. Version 1.
Checksum: 7CABB77330C05D3F

FASTA46652,573
        10         20         30         40         50         60 
MKSSYVVLCA TFAAASFTSS VQAEAILHAF NWKYADVTAN AAQIAAAGYK KVLISPALKS 

        70         80         90        100        110        120 
SGNEWWARYQ PQDLRVIDSP LGNKTDLQTL IKTLQDYGVE VYSDVVFNHM ANESWKRSDL 

       130        140        150        160        170        180 
NYPGSEVLAS YTNQAYYYQQ QKLFGDLSHN LFSQNDFHPE GCITDWGNPG HVQYWRLCGG 

       190        200        210        220        230        240 
AGDRGLPDLD ANAWVINQQR AYLQALKQMG IRGFRIDAVK HMSQYHIDQV FTPEIISGMH 

       250        260        270        280        290        300 
VFGEVITSGG QGDGSYDAFL APYLNNTTHA AYDFPLFASI RAAFSYQGSM SQLHDPQAYG 

       310        320        330        340        350        360 
QALPNARAIT FAITHDIPTN DGFRYQILNP QDEQLAYAYL LGKDGGTPLI YSDDLADHED 

       370        380        390        400        410        420 
KDNGRWANVW NQPSMQHMLR FHNAMQGKPM TVMYSDSCLM LFKRGKEGVV GINKCGESKN 

       430        440        450        460 
VTIDTYQHEF NWYQTYQDTL SDDRFSVSSR YHTLTIPARV ARMWML 

« Hide

References

[1]Balajee S.A., Besser J., Fields P., Frace A.M., Freeman M., Govil D., Humphrys M., Neuhaus E., Olsen-Rasmussen M., Ribot E., Rowe L., Sammons S., Seenu S., Talkington D., Tang K., Tarr C., Gerner-Smidt P.
Submitted (NOV-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 2010EL-1786 EMBL AET29459.1.
[2]"Comparative Genomics of Vibrio cholerae from Haiti, Asia, and Africa."
V. cholerae Outbreak Genomics Task Force
Reimer A.R., Van Domselaar G., Stroika S., Walker M., Kent H., Tarr C., Talkington D., Rowe L., Olsen-Rasmussen M., Frace M., Sammons S., Dahourou G.A., Boncy J., Smith A.M., Mabon P., Petkau A., Graham M., Gilmour M.W., Gerner-Smidt P.
Submitted (OCT-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 2010EL-1786 EMBL AET29459.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003070 Genomic DNA. Translation: AET29459.1.
RefSeqYP_004940013.1. NC_016446.1.

3D structure databases

ProteinModelPortalG7TW89.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAET29459; AET29459; Vch1786_II1041.
GeneID11464075.
KEGGvce:Vch1786_II1041.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01176.

Enzyme and pathway databases

BioCycVCHO914149:GHG2-3943-MONOMER.

Family and domain databases

Gene3D3.20.20.80. 1 hit.
InterProIPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSPR00110. ALPHAAMYLASE.
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameG7TW89_VIBCL
AccessionPrimary (citable) accession number: G7TW89
Entry history
Integrated into UniProtKB/TrEMBL: January 25, 2012
Last sequence update: January 25, 2012
Last modified: March 19, 2014
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)