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G7TRS3

- G7TRS3_VIBCL

UniProt

G7TRS3 - G7TRS3_VIBCL

Protein
Submitted name:

DNA ligase (ATP)

Gene

Vch1786_I1040

Organism
Vibrio cholerae O1 str. 2010EL-1786
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 17 (01 Oct 2014)
      Sequence version 1 (25 Jan 2012)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciVCHO914149:GHG2-1040-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA ligase (ATP)Imported (EC:6.5.1.1Imported)
    Gene namesi
    ORF Names:Vch1786_I1040Imported
    OrganismiVibrio cholerae O1 str. 2010EL-1786Imported
    Taxonomic identifieri914149 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
    ProteomesiUP000006802: Chromosome 1

    Structurei

    3D structure databases

    ProteinModelPortaliG7TRS3.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS00333. DNA_LIGASE_A2. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    G7TRS3-1 [UniParc]FASTAAdd to Basket

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    MLIRLTLTAA AIMLAQQTLA NDGPLAFIPI TYANNYQHGI DIFDYWKSEK    50
    LDGIRAIWTG KQLVTRNGNP IAAPAWFTES LPSYSLEGEL WAGRGNFSLV 100
    QQTVLDSQPA DSAWRKISLM LFDMPDAAGD YSKRYYNLIH LVNSLDLKHI 150
    RYVEHTPIKS EAELLSYLDN ISEKSGEGVM LRKISARYQA GRSNDLLKLK 200
    RHQDAEATVI GYRLGMGKYK GKMGSMLVRT AEGLEFYIGS GFSDVERAEP 250
    PKIGSVITYR YNGLTTEGKP RFARFVRVRE NY 282
    Length:282
    Mass (Da):31,815
    Last modified:January 25, 2012 - v1
    Checksum:iE3E5F1D90D43EFDA
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003069 Genomic DNA. Translation: AET26644.1.
    RefSeqiYP_004937198.1. NC_016445.1.

    Genome annotation databases

    EnsemblBacteriaiAET26644; AET26644; Vch1786_I1040.
    GeneIDi11460859.
    KEGGivce:Vch1786_I1040.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003069 Genomic DNA. Translation: AET26644.1 .
    RefSeqi YP_004937198.1. NC_016445.1.

    3D structure databases

    ProteinModelPortali G7TRS3.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AET26644 ; AET26644 ; Vch1786_I1040 .
    GeneIDi 11460859.
    KEGGi vce:Vch1786_I1040.

    Phylogenomic databases

    KOi K01971.

    Enzyme and pathway databases

    BioCyci VCHO914149:GHG2-1040-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS00333. DNA_LIGASE_A2. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 2010EL-1786Imported.

    Entry informationi

    Entry nameiG7TRS3_VIBCL
    AccessioniPrimary (citable) accession number: G7TRS3
    Entry historyi
    Integrated into UniProtKB/TrEMBL: January 25, 2012
    Last sequence update: January 25, 2012
    Last modified: October 1, 2014
    This is version 17 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3