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G7TRS3 (G7TRS3_VIBCL) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=6.5.1.1 EMBL AET26644.1
Gene names
ORF Names:Vch1786_I1040 EMBL AET26644.1
OrganismVibrio cholerae O1 str. 2010EL-1786 [Complete proteome] EMBL AET26644.1
Taxonomic identifier914149 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio

Protein attributes

Sequence length282 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL AET26644.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA ligation involved in DNA repair

Inferred from electronic annotation. Source: InterPro

DNA recombination

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
G7TRS3 [UniParc].

Last modified January 25, 2012. Version 1.
Checksum: E3E5F1D90D43EFDA

FASTA28231,815
        10         20         30         40         50         60 
MLIRLTLTAA AIMLAQQTLA NDGPLAFIPI TYANNYQHGI DIFDYWKSEK LDGIRAIWTG 

        70         80         90        100        110        120 
KQLVTRNGNP IAAPAWFTES LPSYSLEGEL WAGRGNFSLV QQTVLDSQPA DSAWRKISLM 

       130        140        150        160        170        180 
LFDMPDAAGD YSKRYYNLIH LVNSLDLKHI RYVEHTPIKS EAELLSYLDN ISEKSGEGVM 

       190        200        210        220        230        240 
LRKISARYQA GRSNDLLKLK RHQDAEATVI GYRLGMGKYK GKMGSMLVRT AEGLEFYIGS 

       250        260        270        280 
GFSDVERAEP PKIGSVITYR YNGLTTEGKP RFARFVRVRE NY 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003069 Genomic DNA. Translation: AET26644.1.
RefSeqYP_004937198.1. NC_016445.1.

3D structure databases

ProteinModelPortalG7TRS3.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAET26644; AET26644; Vch1786_I1040.
GeneID11460859.
KEGGvce:Vch1786_I1040.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.

Enzyme and pathway databases

BioCycVCHO914149:GHG2-1040-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
PROSITEPS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameG7TRS3_VIBCL
AccessionPrimary (citable) accession number: G7TRS3
Entry history
Integrated into UniProtKB/TrEMBL: January 25, 2012
Last sequence update: January 25, 2012
Last modified: June 11, 2014
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)