G7TF46 (G7TF46_9XANT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Elongation factor Tu HAMAP-Rule MF_00118
Short name=EF-Tu HAMAP-Rule MF_00118

Gene names

Name:	tuf HAMAP-Rule MF_00118 EMBL AEQ95214.1
ORF Names:	XOC_1012 EMBL AEQ95214.1, XOC_1027 EMBL AEQ95228.1

Organism

Xanthomonas oryzae pv. oryzicola BLS256 EMBL AEQ95214.1

Taxonomic identifier

383407 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Xanthomonadales › Xanthomonadaceae › Xanthomonas › Xanthomonas oryzae › Xanthomonas oryzae pv. oryzicola

Protein attributes

Sequence length	396 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity. HAMAP-Rule MF_00118 RuleBase RU000325
Subunit structure	Monomer By similarity. HAMAP-Rule MF_00118
Subcellular location	Cytoplasm By similarity HAMAP-Rule MF_00118.
Sequence similarities	Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily. HAMAP-Rule MF_00118 RuleBase RU000325

Ontologies

Keywords
Biological process	Protein biosynthesis
Cellular component	Cytoplasm HAMAP-Rule MF_00118
Ligand	GTP-binding HAMAP-Rule MF_00118 RuleBase RU000323 Nucleotide-binding
Molecular function	Elongation factor HAMAP-Rule MF_00118 RuleBase RU000325 EMBL AEQ95214.1
Gene Ontology (GO)
Biological_process	GTP catabolic process Inferred from electronic annotation. Source: GOC
Cellular_component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular_function	GTP binding Inferred from electronic annotation. Source: HAMAP GTPase activity Inferred from electronic annotation. Source: InterPro translation elongation factor activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Regions
	Nucleotide binding	19 – 26	8	GTP By similarity HAMAP-Rule MF_00118
	Nucleotide binding	81 – 85	5	GTP By similarity HAMAP-Rule MF_00118
	Nucleotide binding	136 – 139	4	GTP By similarity HAMAP-Rule MF_00118

Sequences

	Sequence		Length	Mass (Da)
	G7TF46 [UniParc]. Last modified January 25, 2012. Version 1. Checksum: 52EF7D92F89DE0F7	FASTA	396	43,104
	10 20 30 40 50 60 MAKAKFERTK PHVNVGTIGH VDHGKTTLTA ALTKIGAERF GGEFKAYDAI DAAPEEKARG 70 80 90 100 110 120 ITISTAHVEY ESPSRHYAHV DCPGHADYVK NMITGAAQMD GAILVCSAAD GPMPQTREHI 130 140 150 160 170 180 LLSRQVGVPN IVVFLNKADM VDDAELLELV EMEVRELLSK YDFPGDDTPI IRGSARLALD 190 200 210 220 230 240 GDQSEIGVPA ILKLVEALDT FIPEPERDVD KPFLMPVEDV FSISGRGTVV TGRIERGIIK 250 260 270 280 290 300 VGDEIEIVGI RATQKTTVTG VEMFRKLLDQ GQAGDNAGLL LRGTKRDDVE RGQVLCKPGT 310 320 330 340 350 360 IKPHTEFEAE VYVLSKDEGG RHTPFFKGYR PQLYFRTTDI TGAIDLPEGV EMVMPGDNVK 370 380 390 MTVTLINPVA MDEGLRFAIR EGGRTVGAGV VSKIIK

References

[1]

"Two New Complete Genome Sequences Offer Insight into Host and Tissue Specificity of Plant Pathogenic Xanthomonas spp." Bogdanove A.J., Koebnik R., Lu H., Furutani A., Angiuoli S.V., Patil P.B., Van Sluys M.A., Ryan R.P., Meyer D.F., Han S.W., Aparna G., Rajaram M., Delcher A.L., Phillippy A.M., Puiu D., Schatz M.C., Shumway M., Sommer D.D. , Trapnell C., Benahmed F., Dimitrov G., Madupu R., Radune D., Sullivan S., Jha G., Ishihara H., Lee S.W., Pandey A., Sharma V., Sriariyanun M., Szurek B., Vera-Cruz C.M., Dorman K.S., Ronald P.C., Verdier V., Dow J.M., Sonti R.V., Tsuge S., Brendel V.P., Rabinowicz P.D., Leach J.E., White F.F., Salzberg S.L. J. Bacteriol. 193:5450-5464(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: BLS256 EMBL AEQ95214.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP003057 Genomic DNA. Translation: AEQ95214.1. CP003057 Genomic DNA. Translation: AEQ95228.1.
RefSeq	YP_005627381.1. NC_017267.1. YP_005627395.1. NC_017267.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AEQ95214; AEQ95214; XOC_1012. AEQ95228; AEQ95228; XOC_1027.
GeneID	12272962. 12272974.
KEGG	xor:XOC_1012. xor:XOC_1027.
Phylogenomic databases
KO	K02358.
Family and domain databases
HAMAP	MF_00118_B. EF_Tu_B.
InterPro	IPR000795. EF_GTP-bd_dom. IPR005225. Small_GTP-bd_dom. IPR009001. Transl_elong_EF1A/Init_IF2_C. IPR004161. Transl_elong_EFTu/EF1A_2. IPR004541. Transl_elong_EFTu/EF1A_bac/org. IPR004160. Transl_elong_EFTu/EF1A_C. IPR009000. Transl_elong_init/rib_B-barrel. [Graphical view]
Pfam	PF00009. GTP_EFTU. 1 hit. PF03144. GTP_EFTU_D2. 1 hit. PF03143. GTP_EFTU_D3. 1 hit. [Graphical view]
PRINTS	PR00315. ELONGATNFCT.
SUPFAM	SSF50465. Elong_init_C. 1 hit. SSF50447. Translat_factor. 1 hit.
TIGRFAMs	TIGR00485. EF-Tu. 1 hit. TIGR00231. small_GTP. 1 hit.
PROSITE	PS00301. EFACTOR_GTP. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

G7TF46_9XANT

Accession

Primary (citable) accession number: G7TF46

Entry history

Integrated into UniProtKB/TrEMBL:	January 25, 2012
Last sequence update:	January 25, 2012
Last modified:	April 3, 2013
This is version 11 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)