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G7SQG6 (G7SQG6_9FLAO) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 17. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length329 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Cell wall formation By similarity. HAMAP-Rule MF_00047 SAAS SAAS005905

Catalytic activity

ATP + 2 D-alanine = ADP + phosphate + D-alanyl-D-alanine. HAMAP-Rule MF_00047 SAAS SAAS005905

Cofactor

Binds 2 magnesium or manganese ions per subunit By similarity. HAMAP-Rule MF_00047 SAAS SAAS005905

Pathway

Cell wall biogenesis; peptidoglycan biosynthesis. HAMAP-Rule MF_00047 SAAS SAAS005905

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00047 SAAS SAAS005905.

Sequence similarities

Belongs to the D-alanine--D-alanine ligase family. HAMAP-Rule MF_00047

Contains 1 ATP-grasp domain. HAMAP-Rule MF_00047

Contains ATP-grasp domain. SAAS SAAS005905

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Domain121 – 320200ATP-grasp By similarity HAMAP-Rule MF_00047
Nucleotide binding149 – 20456ATP By similarity HAMAP-Rule MF_00047

Sites

Metal binding2751Magnesium or manganese 1 By similarity HAMAP-Rule MF_00047
Metal binding2871Magnesium or manganese 1 By similarity HAMAP-Rule MF_00047
Metal binding2871Magnesium or manganese 2 By similarity HAMAP-Rule MF_00047
Metal binding2891Magnesium or manganese 2 By similarity HAMAP-Rule MF_00047

Sequences

Sequence LengthMass (Da)Tools
G7SQG6 [UniParc].

Last modified January 25, 2012. Version 1.
Checksum: ED1F40975708310D

FASTA32937,692
        10         20         30         40         50         60 
MKKIAIVMGG YTEESVISLK SGKVVYENLN RKEFLPYKIY IYRDQWILKD EKNHEYPINK 

        70         80         90        100        110        120 
HDFTVCLKQD QILKFDCVFN VIHGTPGEDG ILQSYFHLLK IPYTGCNFHQ SNITFNKKYC 

       130        140        150        160        170        180 
LTFLKEFGID TAVSFFLNKN QPFCEKNIIK KVGLPCFVKP NRAGSSLGIS KVYKKEDLLP 

       190        200        210        220        230        240 
SIEKAFKEDH EIIIESFLKG IEVSVGVISF NHQIKVLPIT EIISRNDFFD FESKYGGGSQ 

       250        260        270        280        290        300 
EITPARLLPN IERKIQKLAK KVCNILNLSG ISRSEYILVK DTPFFLEINT IPGLSEESIF 

       310        320 
PKQLNIAGIS LSDLFKQSID YSIECSKKL 

« Hide

References

[1]"Genome shrinkage and loss of nutrient-providing potential in the obligate symbiont of the primitive termite Mastotermes darwiniensis."
Sabree Z.L., Huang C.Y., Arakawa G., Tokuda G., Lo N., Watanabe H., Moran N.A.
Appl. Environ. Microbiol. 0:0-0(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: MADAR EMBL AER40775.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003000 Genomic DNA. Translation: AER40775.1.
RefSeqYP_004928600.1. NC_016146.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAER40775; AER40775; MADAR_486.
GeneID11372562.
KEGGbmm:MADAR_486.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01921.

Enzyme and pathway databases

BioCycBSP1074889:GJTT-483-MONOMER.
UniPathwayUPA00219.

Family and domain databases

Gene3D3.30.1490.20. 1 hit.
3.30.470.20. 2 hits.
3.40.50.20. 1 hit.
HAMAPMF_00047. Dala_Dala_lig.
InterProIPR011761. ATP-grasp.
IPR013815. ATP_grasp_subdomain_1.
IPR013816. ATP_grasp_subdomain_2.
IPR000291. D-Ala_lig_Van_CS.
IPR005905. D_ala_D_ala.
IPR011095. Dala_Dala_lig_C.
IPR011127. Dala_Dala_lig_N.
IPR016185. PreATP-grasp_dom.
[Graphical view]
PANTHERPTHR23132. PTHR23132. 1 hit.
PfamPF07478. Dala_Dala_lig_C. 1 hit.
PF01820. Dala_Dala_lig_N. 1 hit.
[Graphical view]
SUPFAMSSF52440. SSF52440. 1 hit.
TIGRFAMsTIGR01205. D_ala_D_alaTIGR. 1 hit.
PROSITEPS50975. ATP_GRASP. 1 hit.
PS00843. DALA_DALA_LIGASE_1. 1 hit.
PS00844. DALA_DALA_LIGASE_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameG7SQG6_9FLAO
AccessionPrimary (citable) accession number: G7SQG6
Entry history
Integrated into UniProtKB/TrEMBL: January 25, 2012
Last sequence update: January 25, 2012
Last modified: February 19, 2014
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)