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G7RQ45

- G7RQ45_ECOC1

UniProt

G7RQ45 - G7RQ45_ECOC1

Protein
Submitted name:

Periplasmic alpha-amylase

Gene

malS

Organism
Escherichia coli (strain 'clone D i14')
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 13 (01 Oct 2014)
      Sequence version 1 (25 Jan 2012)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. alpha-amylase activity Source: InterPro
    2. calcium ion binding Source: InterPro

    GO - Biological processi

    1. alpha-glucan catabolic process Source: InterPro
    2. cellular oligosaccharide catabolic process Source: InterPro

    Enzyme and pathway databases

    BioCyciECOL885275:GJE6-4078-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Periplasmic alpha-amylaseImported
    Gene namesi
    Name:malSImported
    Ordered Locus Names:i14_4059Imported
    OrganismiEscherichia coli (strain 'clone D i14')Imported
    Taxonomic identifieri885275 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
    ProteomesiUP000005864: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. periplasmic space Source: InterPro

    Structurei

    3D structure databases

    ProteinModelPortaliG7RQ45.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK01176.

    Family and domain databases

    Gene3Di3.20.20.80. 1 hit.
    InterProiIPR014635. A_amylase_MalS.
    IPR015902. Glyco_hydro_13.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    [Graphical view]
    PIRSFiPIRSF036917. Alph_amls_MalS. 1 hit.
    SMARTiSM00642. Aamy. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 2 hits.

    Sequencei

    Sequence statusi: Complete.

    G7RQ45-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKLAACFLTL LPGFAVAASW TSPGFPAFSE QGTGTFVSHA QLPKGTRPLM    50
    LNFDQQCWQP ADAIKLNQML SLQPCSNTPP QWRLFRDGEY TLQLDTRSGT 100
    PTLMISLQNT VEPVASLVRE CPKWDGLPLT LDVSATFAEG AAVRDYYSQQ 150
    IAIVKNGQIT LQPAATSNGL LLLERAETDT SAPFDWHNAT VYFVLTDRFE 200
    NGDPSNDQSY GRHKDGMAEI GTFHGGDLRG LTNKLDYLQQ LGVNALWISA 250
    PFEQIHGWVG GGTKGDFPHY AYHGYYTQDW TNLDANMGSE ADLRTLVDSA 300
    HQRGIRILFD VVMNHTGYAT LADMQEYQFG ALYLSGDELK KTLGERWSDW 350
    KPAAGQTWHS FNDYINFSDK TGWDKWWGKN WIRTDIGDYD NPGFDDLTMS 400
    LAFLPDIKTE STSASGLPVF YKNKTDTHAK DIDGFTPRDY LTHWLSQWVR 450
    DYGIDGFRVD TAKHVELPAW QQLKTEASAA LREWKKANPD KALDDKPFWM 500
    TGEAWGHGVM QSDYYRHDFD AMINFDYQEQ AAKAVDCLAQ MDTTWQQMAE 550
    KLQDFNVLSY LSSHDTRLFR EGGDKAAELL LLAPGAVQIF YGDESSRPFG 600
    PTGSDPLQGT RSDMNWQDVS GKSAASVAHW QKISQFRARH PAIGAGKQTT 650
    LSLKQGYGFV REHGDDKVLV IWAGQQ 676
    Length:676
    Mass (Da):75,848
    Last modified:January 25, 2012 - v1
    Checksum:i77F46F02CAC3AD4A
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002212 Genomic DNA. Translation: AER91504.1.
    RefSeqiYP_006156128.1. NC_017652.1.

    Genome annotation databases

    EnsemblBacteriaiAER91504; AER91504; i14_4059.
    GeneIDi12666783.
    KEGGielc:i14_4059.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002212 Genomic DNA. Translation: AER91504.1 .
    RefSeqi YP_006156128.1. NC_017652.1.

    3D structure databases

    ProteinModelPortali G7RQ45.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AER91504 ; AER91504 ; i14_4059 .
    GeneIDi 12666783.
    KEGGi elc:i14_4059.

    Phylogenomic databases

    KOi K01176.

    Enzyme and pathway databases

    BioCyci ECOL885275:GJE6-4078-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.80. 1 hit.
    InterProi IPR014635. A_amylase_MalS.
    IPR015902. Glyco_hydro_13.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF036917. Alph_amls_MalS. 1 hit.
    SMARTi SM00642. Aamy. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 2 hits.
    ProtoNeti Search...

    Publicationsi

    1. "Rates of mutation and host transmission for an Escherichia coli clone over 3 years."
      Reeves P.R., Liu B., Zhou Z., Li D., Guo D., Ren Y., Clabots C., Lan R., Johnson J.R., Wang L.
      PLoS ONE 6:E26907-E26907(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 'clone D i14'Imported.

    Entry informationi

    Entry nameiG7RQ45_ECOC1
    AccessioniPrimary (citable) accession number: G7RQ45
    Entry historyi
    Integrated into UniProtKB/TrEMBL: January 25, 2012
    Last sequence update: January 25, 2012
    Last modified: October 1, 2014
    This is version 13 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3